2024-05-04 22:43:27, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_055426173 6661 bp mRNA linear MAM 20-APR-2023 DEFINITION PREDICTED: Moschus berezovskii ATPase copper transporting beta (ATP7B), transcript variant X5, mRNA. ACCESSION XM_055426173 VERSION XM_055426173.1 DBLINK BioProject: PRJNA955228 KEYWORDS RefSeq. SOURCE Moschus berezovskii (Chinese forest musk deer) ORGANISM Moschus berezovskii Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Moschidae; Moschus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_026573367) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_022376915.1-RS_2023_04 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 04/13/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6661 /organism="Moschus berezovskii" /mol_type="mRNA" /isolate="MB002" /db_xref="taxon:68408" /chromosome="Unknown" /tissue_type="blood" /dev_stage="adult" /ecotype="Sichuan" gene 1..6661 /gene="ATP7B" /note="ATPase copper transporting beta; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 7 Proteins" /db_xref="GeneID:129556298" CDS 423..4760 /gene="ATP7B" /codon_start=1 /product="copper-transporting ATPase 2 isoform X5" /protein_id="XP_055282148.1" /db_xref="GeneID:129556298" /translation="
MKPEEERPIIDREEASRRILSELSQPAMKQSFAFDNSGYEDDLDGVRPSQTATGTISIVGMTCQSCVKSIEGRVSSLNGIVSIKVSLEQGSAEVRYMPSVVSLMQICHQIEDMGFQASVAEGKATSWPSRVSPTSEAMVKLRVEGMTCQSCVSSIEGKIGKLQGVMRVRVSLSNQEAVITYQPYLIQPQDLRDHITDMGFEAVIKNKVAPVSLGPIDVRRLQSTLSAAPPAPVNQNDNNSETRGGQGVPLHLRVDGMHCKSCVLNIEDNIGRLPGVQSIHVSLESRTARVQYDPSLISLGALWRAIEALPPGNFKVSLPNGAEGGGPDSRSPPVPNPPCTVMLAIAGMTCKSCVQSIEGLISQRAGVHQISVFLAEGTAVVLYDPSRTHPEELRAAVEDMGFEASILAENCSSNHIGNHSAGSAMGHAAAGAPMPMQRGAPQPGGLHTNHIPRQSPKSLLASTTVAAKKCFLQISGMTCASCVSNIERNLQKEPGILSVLVALMAGKAEVKYNPEVIQPLEIAKLVQDLGFEAAVMEDYTGSDGDLELMITGMTCASCVHNIESKLRRTDGITYASVALATSKAHVKFDPEIIGPRDIVKLIEEIGFHASLAQRIPSAHHLDHKVEIKQWKNSFLCSLVFGIPVMGLMIYMLIPSREPQATVLDHSVIPGLSIVNLIFFILCTFVQFLGGWYFYVQAYKSLRHGVANMDVLIVLATSIAYVYSLVILVVAVAEKAERSPVTFFDTPPMLFVFIALGRWLEHVVKSKTSEALAKLMSLQATEATVVTLGEDNVIIREEQVPMELVQRGDIIKVVPGGKFPVDGKVLEGNTMADESLITGEAMPVTKKPGSMVIAGSMNAHGSVLITATHVGNDTTLAQIVKLVEEAQMSKAPIQQLADRFSGYFVPFIIIISTVTLVVWIVIGFIDFGVVQKYFPAPSKGISQAEVVLRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHKIKTVMFDKTGTITHGVPKVSRVLLLVDMAALPLRKVLAVVGTAEASSEHPLGVAVTRYCKEELGTETLGCCTDFQAVPGCGISCKVSSVESILAQGECPQGPPTTHLNRVGSDPTETADAATQTFSVLIGNREWMRRNGLTVTSDVRDAMTDHEMKGQTAILAAIDGVLCGMIAIADSVKQEAALAVHTLKSMGVDVVLITGDNRKTARAIATQVGINKVFAEVLPSHKVAKVQELQNEGKRVAMVGDGVNDSPALAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSRRTVWRIRLNLVLALIYNLIGIPVAAGVFIPIGVVLQPWMGSAAMAASSVSVVLSSLQLKCYRKPDLARYEAQAHGRMKPLSASQVSVHIGMDDRRRDSPRASPWDQVSYISQVSLTSLKSDKMSRHSGAADDRGDKWSLLLNDRDEEQGI"
ORIGIN
cggccccctcccccaccgaagcccccgctccggcgcccaggcccctattctagagccccgccggtcggaaaccaatgggaggcgcttgcgcgtctgggatcgattttccaggtgcggagttcacaaccgcagcagccgcagcgattcggatccgcggcgccctggagtcaggcgcggagccccagagggagctgcgcagagcggacccgacggtgacccccgccacgccgcaccctcccggccgacagtgggcgagcctggggatctgcatctctggcccgggtctacgcggctcgccctggctccttttctcccttggcacacgcccaaggctgaagacagaccgaggccagggcgcaccggtccaggaggtgaccttggactccggactgaatcacagaagaaattagttcctccgcgagatgaagccagaggaggagagaccgattatagatcgcgaagaggccagtcggagaatcctgtctgagctttcccagccagcgatgaagcagagctttgcctttgacaacagtggctacgaggatgacctggatggtgtgcgcccctcccagacagccacgggcaccatcagcatcgtgggcatgacctgccagtcatgtgtcaagtccatcgagggcagggtctccagtttgaatggcattgtgagcattaaggtttccctggagcagggcagcgctgaggtgaggtacatgccctcagtggtaagcctgatgcagatttgccatcagattgaagacatgggcttccaggccagtgtggccgagggaaaggccacctcctggccctccagggtctcgcccacctcggaggccatggtcaagcttcgggtggagggcatgacctgccagtcctgtgtcagctccatagaaggcaagatcgggaaactgcagggtgtcatgagggtccgcgtctcgctcagcaaccaggaggcagtcatcacttaccagccttaccttatccaaccccaagacctcagggaccacataaccgacatggggtttgaagccgtcatcaagaacaaggtggcccccgtgagcctgggacccatagatgtcaggcggcttcagagcaccctctcagcggcccctccagctcctgttaatcagaatgacaataactctgagacccggggcggccagggggtccccctgcacctgagagtggatggaatgcactgtaagtcttgtgtcctgaacatcgaagacaatatcggccggctccctggggttcagagtattcacgtgtccctggagagcaggactgcccgagtccagtacgacccttctctcatctccctgggggccctgtggagggccatcgaggccctgcctcctgggaactttaaagtctctcttcccaatggggcggaagggggtgggccagactccaggagccccccagtgcccaatccgccctgtaccgtgatgctggccatcgctggcatgacctgcaagtcctgcgtccagtccattgaaggcctgatttcccagagggcgggcgtgcaccagatctcagtctttttggctgaagggactgcagtggttctctacgatccatctcgaactcacccagaagaactgcgagccgcggtggaggatatgggattcgaggcctccatcctggccgaaaactgttccagcaaccacattgggaaccacagtgctgggagtgccatggggcacgcagcagctggcgcacccatgcccatgcagagaggggctccccagccaggggggctccatactaaccacatcccccgccagtcgcccaagtccctgctggcctccaccacggtggccgcaaagaagtgcttcctacagatctcaggcatgacctgtgcatcctgtgtatcgaacatagagaggaacctgcagaaagaacctgggatcctatccgtgctggttgccctgatggcgggaaaggcagaggtgaagtacaacccggaagtcatccagcccctggagatagcaaagctcgtccaggacctgggctttgaggcagcagtgatggaagactacacgggctcagatggtgacctcgagctgatgatcacggggatgacctgcgcctcctgtgttcacaacatagagtccaaactcaggaggacagacggcatcacctatgcctctgtggctctcgccaccagcaaagcccacgtgaagtttgatcctgaaattattggtccgcgggatattgtcaaacttatcgaggaaattggctttcacgcctccctggcccagaggatccccagcgctcatcacttggaccacaaggtggaaataaagcagtggaagaactcgttcctgtgcagcctggtgtttggcatccccgtcatgggtttaatgatctatatgttgatacccagccgtgagccccaggccacggtcctggaccacagcgtcatcccggggctgtccatcgtgaatctcatcttctttatcttgtgcacctttgtccagtttcttggcggctggtacttctatgtccaggcctacaaatctctgagacacggggtggccaacatggacgtgctcatcgtgctggccacgagcatcgcctacgtctactcgctcgtcatcctggtggtggccgtggccgagaaggccgagaggagccccgtgaccttctttgacacgccccccatgctcttcgtcttcatcgccctggggcggtggctggaacacgtggtgaagagcaaaacctcagaagcgcttgccaaactcatgtctctgcaagccacggaagccaccgtcgtgacccttggtgaagacaacgtgatcatcagggaggagcaggtgcccatggagctggtgcaacgaggtgacatcatcaaggtggtccctgggggcaagtttcccgtggacgggaaagtcctagaaggcaacaccatggccgatgagtccctcatcacaggagaggccatgcctgtcaccaagaagcccggaagcatggtaatcgccgggtccatgaacgcccatggctctgtgctcatcactgccacccacgtgggcaatgacaccaccttggcccagattgtgaagctagtagaagaggcccagatgtccaaggcacccattcagcaactggctgaccggtttagtggatattttgtcccatttatcatcatcatttcaactgtgacgttggtggtatggattgtaatcggttttatcgattttggtgttgttcagaaatactttcctgcccccagcaagggcatctcccaggcagaggtggtcctgcggttcgcgttccagacgtccatcacggtgctctgcatcgcctgcccctgctcgctgggcctggccacgcccacggccgtcatggtgggcaccggggtggccgcccagaacggcatcctcatcaagggaggcaagcccctggagatggcccacaagataaagaccgtgatgttcgacaaaactggcaccattacccacggggtccccaaagtctcgcgggtcctcctgctcgtggacatggccgcactgcccctgcggaaggtgcttgctgtggtggggaccgcggaggccagcagcgagcaccccctgggcgtggcggtcaccagatactgtaaagaggaactcggcacggagaccctggggtgctgcacggacttccaggcggtgcctggctgtggaatcagctgcaaagtcagcagcgtggagagcatcctcgcccagggcgagtgcccacagggcccaccgaccactcacctgaacagagtcggcagcgaccccacagaaacagcagatgcggccacgcagaccttctctgtgctgatcggaaaccgggaatggatgagacgcaacggcctgaccgtcaccagcgacgtccgcgacgccatgaccgaccacgagatgaagggccagacggccatcctggcggccatcgacggtgtgctgtgcggtatgatcgccatcgcggactcggtcaagcaggaggccgccctggccgtgcacacgctgaaaagcatgggcgtggatgtggtgctcatcaccggggacaaccgcaagacagccagggccatcgccacccaggttggcatcaacaaagtctttgcggaggtgctgccttctcacaaggtggccaaggtccaggagctgcagaacgaggggaagagagtggccatggtgggtgatggcgtgaacgactccccagccctggcgcaggccgacgtgggcattgccatcggcacgggcaccgacgtggccattgaggcggccgacgtcgtcctcatcaggaatgacctactcgacgtggtggccagcattcatctctccaggaggaccgtctggagaatacgactcaacctggtgctggcgctgatctacaacctgatcgggatccccgtcgcagcaggtgtcttcatacccattggcgtcgtgctgcagccgtggatgggctcggcagccatggcggcctcctccgtgtccgtggtcctctcgtcactgcagctcaagtgctacaggaagccggacctggcgcggtacgaggcgcaggcgcacggccgcatgaagcccctgagcgcgtcccaggtcagcgtgcacatcggcatggacgaccgccggcgcgactccccgcgggcctcgccctgggaccaggtcagctacatcagtcaggtgtccctgacctccctcaagtccgacaagatgtcccggcacagcggcgcggccgacgacaggggcgacaagtggtctctgctcctgaatgaccgggacgaggagcagggcatctgaaagccgccgggggccggcccccgtggctgaggctccgagccagcagcggcagcagcaggcggccgggcccctccaggcctgggcgaatattctggattccctgcgtccagggggcgcgatttccccgatcccacgcgctcgggggaggcgtgcttgctcacgcccgtgggctcatcaaacaccttgctgtggcctcgagaagagggtcaagccctcctcgcatcccctgccttagcaattgtgacacggccagtctcatcgggtccaacatcttcgccgcgcccctccacagagctcataaaaacttcggggcctggctctttctgacagcacccgcgtgcatcgcctacctgagaccaccgtgtacctcaggtgcccccttgtttcctgctggcgccgtctcttcctcctctgcctttgacggtgggagtgggacaccctgtcatctgagggcagggctgacatcgtcacgtcccctctgctgctctccaaggggctcctgtgctcctgcctgaaccccttgcccacacgaccgccagagagcctgccacgcttctcctcggtgaccagaggtcttggttgcccgcgagccgcttctccctagagtcctggcttctcacgtgtaatccagtgtggttgctgactgtcgctgcctagctgggctgagggtctgagagcctgaggcttgagaaattcggcttcctgtggggtcctgggggaggcacgtggttcaagatcttgcttgcctggtttcaggggcttcggctgcatggcctgcggtgtgacagtcacctcacagggtctggcgtggggttcaggtctgtgctccccagagccgtgcagtcctggggcagtgagacccaagtaagaggacaccccagccctccacgcgcttcgacgcctgcacgtggagctggtgccttaggaagggggtgcccaccactcccaagggaacgtctgtttctaactttcagtggcctttatggttgcacgatagtcagagggacagcagtgggcccatggcagactccgagcttggtggtgattggcagagcctgtgggagtctgctaatagtagccaaatcttagactaagtgagtagagcctgttctcagtttcgagggggaagcccttatcacacacactttagttatttattgtcagttatttttcagggggatataagcactttttatcgcttacctctaatcctcacaacgaactagcaaagtagatattgtccacattttgcaggcgggaaacaggctcagagaggctagtaatccctcccaggatcacacagccagtgtgcatgccagagcagggatctgaattcacagccacgggccttgaagtcttttctttaatttggctctactgtcaatattttgtttgataagaagcaacaaggaaaaggcccttgttcctggaagaacaaagctgccaggtgatgtattcgctgaactggcttgaaatgtgaccatgaggtcatgtcacgttgcctttggatagctcctttccatttgcatataattgagtctgtgctgtgtctcatcctctaaactccacgtgcagggtggtggtgtggttttctgtttccagtcttcttccctagccccttcctcctgtgttcccaattgtgtcctttctctgctcccagctcctgcttggggaatgtttcctgtttccccccaaggaagctaatcattatctaaagaatccaattctatcagtttttcaaaaagcttttaggaccataaatgttatgtttataggaacatggagatatttatataattgtacagaagataaccttttagctgttcaaaagtgtcaggaattttttttgttgtttgtttttttggtcaggaaagaagaattcctatttcaaaaacattcta
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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