2024-05-18 16:07:17, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_054689336 1319 bp mRNA linear MAM 29-MAR-2023 DEFINITION PREDICTED: Talpa occidentalis uncharacterized LOC119232347 (LOC119232347), mRNA. ACCESSION XM_054689336 VERSION XM_054689336.1 DBLINK BioProject: PRJNA674757 KEYWORDS RefSeq. SOURCE Talpa occidentalis (Iberian mole) ORGANISM Talpa occidentalis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Talpidae; Talpa. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_023605083.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_014898055.3-RS_2023_03 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 03/24/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1319 /organism="Talpa occidentalis" /mol_type="mRNA" /isolate="TD23" /db_xref="taxon:50954" /chromosome="Unknown" /sex="male" /tissue_type="spleen" /dev_stage="adult" gene 1..1319 /gene="LOC119232347" /note="uncharacterized LOC119232347; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:119232347" CDS 131..1177 /gene="LOC119232347" /codon_start=1 /product="uncharacterized protein LOC119232347" /protein_id="XP_054545311.1" /db_xref="GeneID:119232347" /translation="
MKGRKKLQWQWLANAPKAMVPKSMRTQQEAKQIMKNEPQKSDEDFDSGHRPPRHNSQMKGRKKLQWQWLANAPKAMVPKSRSCYPQPQQPQLQSDSWMHNNLPYATEKKKKDEKKGRNYLKTLERSGLVVRTQQEAKQITKNEPQKSDEDFDSGHRPPRHNSQMKGRKKLQWQWLANAPKAMVPKSRSYNPQPQLPLLQSDSWMHNNLPYATGSCSPQALQPQLQSYSWIQNNSPYGTGDLRPAPALDPPAPPGTPRMTHFVDQYRVQLVDRVTSVDPILDRLLGQVLSYEQYETIRAEAIPQGQMRKLFSLLRSWNRAGKDLLYQALKDTQPYLIMDLLEKGHSRGH"
misc_feature 908..1150 /gene="LOC119232347" /note="Caspase activation and recruitment domain found in Human ASC, NALP1, and similar proteins; Region: CARD_ASC_NALP1; cd08330" /db_xref="CDD:260039" ORIGIN
gaaaacattggaaaggtcaggcctagttgtgagaacccaacaagaagctaagcaaataacgaagaatgagccacaaaagagtgatgaagacttcgattctggtcaccggcctccaagacacaattctcagatgaagggtcgaaagaagttacagtggcaatggttggctaatgccccaaaagctatggtgcctaaatcaatgagaacccaacaagaagctaagcaaataatgaagaatgagccacaaaagagtgatgaagacttcgattctggtcaccggcctccaagacacaattctcagatgaagggtcgaaagaagttacagtggcaatggttggctaatgccccaaaagctatggtgcctaaatcaaggagctgctatcctcaacctcagcaacctcaactccagagtgactcatggatgcacaacaacctaccttatgcgactgaaaagaagaaaaaagatgaaaagaagggacgtaactatctgaaaacattggaaaggtcaggcctagttgtgagaacccaacaagaagctaagcaaataacgaagaatgagccacaaaagagtgatgaagacttcgattctggtcaccggcctccaagacacaattctcagatgaagggtcgaaagaagttacagtggcaatggttggctaatgccccaaaagctatggtgcctaaatcaaggagctacaatcctcaacctcagctacctctactccagagtgactcatggatgcacaacaacctaccttatgcgactgggagctgcagtcctcaagctctgcaacctcaactccagagttactcatggatccagaacaactcaccttatgggactggagacctcagacctgcacccgcactggatcctccagccccgccaggcacaccaaggatgacacacttcgtggaccagtatcgagtgcagctggtggatcgagtgacatcagtggaccccatcctggacaggctgctcgggcaggtgttgagttatgagcagtatgagaccatcagggccgaggccatcccgcagggccagatgaggaagctgttcagtttgctcaggtcctggaaccgggctggcaaagatctcctctaccaggccctgaaggacacccagccttacctaattatggatctcttggagaaggggcacagtagaggacactgaggggctcttgcccagcttggcaggtgacttctgcacacctgagtcctggctctcctggtcactcttgagtctcgttttcttcatctctaaataagaggcatctgagatgcgttctcgctgtaaagttatcgactctggggcc
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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