2024-05-19 07:42:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_052252328 1196 bp mRNA linear PLN 13-FEB-2023 DEFINITION PREDICTED: Arachis duranensis plasma membrane ATPase 2-like (LOC127740719), transcript variant X1, mRNA. ACCESSION XM_052252328 VERSION XM_052252328.1 DBLINK BioProject: PRJNA316327 KEYWORDS RefSeq. SOURCE Arachis duranensis ORGANISM Arachis duranensis Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; dalbergioids sensu lato; Dalbergieae; Pterocarpus clade; Arachis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_029778) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Updated annotation Annotation Name :: GCF_000817695.3-RS_2023_02 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 02/09/2023 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1196 /organism="Arachis duranensis" /mol_type="mRNA" /cultivar="V14167" /db_xref="taxon:130453" /chromosome="7" /tissue_type="whole plant" /country="Argentina: Salta, Prov. Salta" /collection_date="2012" gene 1..1196 /gene="LOC127740719" /note="plasma membrane ATPase 2-like; Derived by automated computational analysis using gene prediction method: Gnomon." /db_xref="GeneID:127740719" CDS 603..953 /gene="LOC127740719" /codon_start=1 /product="plasma membrane ATPase 2-like" /protein_id="XP_052108288.1" /db_xref="GeneID:127740719" /translation="
MVELRRKQRQFCFCPVDDIIENTDGFAGVFPKHKYDIVTRLQARNHVCGMIGDGVNDAPALKIADIGIAVADATDGARSASDIVLTEPGLNVIISAVLTSRAIFQRMKNYTVIPQQ"
misc_feature <645..>938 /gene="LOC127740719" /note="plasma-membrane proton-efflux P-type ATPase; Region: ATPase-IIIA_H; TIGR01647" /db_xref="CDD:273731" ORIGIN
gcaacaaattagatcatgagaatttttttatctattttgggttcatatagctcatctgctagatattcagaagcatgtgaacttattgaatgcttgagaggataaaatgatcactgaagcactcatcattatattttgcaaggctaaaaagcttgatgcagtcttggaggagtacaaaagtaaaggaggaatcggtttctatcactcatcacttattttccattactacagttcaatgcttgagaggataaaatgatcactgaagcactcatcattatattttgcaaggctaaaaagcttgatgcagccttggaggagtacagaagtagaggaggaatcggtttctatcactcatcacttatttcccattgctgcagttgattttcaggaaattaaattccctatgtttagcactatggaattcagataaattttggttatcgatttcatcatttcacttcaaaactagaatagtgcattagcagttaaaggacattaaaaccaattgaatattcttgtgttctcatcttcggccaccgtatatggttggccaaaggaggttctatgtacagaagagtttcctctgtcagcaatgaatccatatggtcgaattaaggagaaagcaaagacaattttgcttctgtcccgttgatgatattatagagaatacagatggttttgctggtgtctttcctaagcacaaatatgatattgtgacgaggttacaagctagaaatcacgtttgtgggatgattggtgatggagtgaatgatgcaccagctttgaagatagccgacataggtatcgctgtagcagatgccacagacggtgcaagaagtgcctctgacatagttctaacagaacctgggttgaatgtgatcataagtgctgttttaactagccgtgcaattttccaaagaatgaaaaactacacagtaatcccccaacaataaaaatattgataaaatattgcaatagtccttgttgtaacgaaaaatttatcaaagccttattttatttttcttttgcagatatatgttgtatctgtcaccatccgtattgtggtaagttataagtgcatatatggagaatttagcagtgatcaagccatcattttctttccttctcattttcagtttattttgctttacaggttggctttatgttactcacatgcatttgggaatttaactttt
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by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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