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2024-05-19 07:42:41, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_052252328            1196 bp    mRNA    linear   PLN 13-FEB-2023
DEFINITION  PREDICTED: Arachis duranensis plasma membrane ATPase 2-like
            (LOC127740719), transcript variant X1, mRNA.
ACCESSION   XM_052252328
VERSION     XM_052252328.1
DBLINK      BioProject: PRJNA316327
KEYWORDS    RefSeq.
SOURCE      Arachis duranensis
  ORGANISM  Arachis duranensis
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50
            kb inversion clade; dalbergioids sensu lato; Dalbergieae;
            Pterocarpus clade; Arachis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_029778) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000817695.3-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/09/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1196
                     /organism="Arachis duranensis"
                     /mol_type="mRNA"
                     /cultivar="V14167"
                     /db_xref="taxon:130453"
                     /chromosome="7"
                     /tissue_type="whole plant"
                     /country="Argentina: Salta, Prov. Salta"
                     /collection_date="2012"
     gene            1..1196
                     /gene="LOC127740719"
                     /note="plasma membrane ATPase 2-like; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon."
                     /db_xref="GeneID:127740719"
     CDS             603..953
                     /gene="LOC127740719"
                     /codon_start=1
                     /product="plasma membrane ATPase 2-like"
                     /protein_id="XP_052108288.1"
                     /db_xref="GeneID:127740719"
                     /translation="
MVELRRKQRQFCFCPVDDIIENTDGFAGVFPKHKYDIVTRLQARNHVCGMIGDGVNDAPALKIADIGIAVADATDGARSASDIVLTEPGLNVIISAVLTSRAIFQRMKNYTVIPQQ"
     misc_feature    <645..>938
                     /gene="LOC127740719"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
gcaacaaattagatcatgagaatttttttatctattttgggttcatatagctcatctgctagatattcagaagcatgtgaacttattgaatgcttgagaggataaaatgatcactgaagcactcatcattatattttgcaaggctaaaaagcttgatgcagtcttggaggagtacaaaagtaaaggaggaatcggtttctatcactcatcacttattttccattactacagttcaatgcttgagaggataaaatgatcactgaagcactcatcattatattttgcaaggctaaaaagcttgatgcagccttggaggagtacagaagtagaggaggaatcggtttctatcactcatcacttatttcccattgctgcagttgattttcaggaaattaaattccctatgtttagcactatggaattcagataaattttggttatcgatttcatcatttcacttcaaaactagaatagtgcattagcagttaaaggacattaaaaccaattgaatattcttgtgttctcatcttcggccaccgtatatggttggccaaaggaggttctatgtacagaagagtttcctctgtcagcaatgaatccatatggtcgaattaaggagaaagcaaagacaattttgcttctgtcccgttgatgatattatagagaatacagatggttttgctggtgtctttcctaagcacaaatatgatattgtgacgaggttacaagctagaaatcacgtttgtgggatgattggtgatggagtgaatgatgcaccagctttgaagatagccgacataggtatcgctgtagcagatgccacagacggtgcaagaagtgcctctgacatagttctaacagaacctgggttgaatgtgatcataagtgctgttttaactagccgtgcaattttccaaagaatgaaaaactacacagtaatcccccaacaataaaaatattgataaaatattgcaatagtccttgttgtaacgaaaaatttatcaaagccttattttatttttcttttgcagatatatgttgtatctgtcaccatccgtattgtggtaagttataagtgcatatatggagaatttagcagtgatcaagccatcattttctttccttctcattttcagtttattttgctttacaggttggctttatgttactcacatgcatttgggaatttaactttt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]