LOCUS       XM_051987384            6489 bp    mRNA    linear   MAM 26-FEB-2023
DEFINITION  PREDICTED: Antechinus flavipes ATPase copper transporting beta
            (ATP7B), mRNA.
ACCESSION   XM_051987384
VERSION     XM_051987384.1
DBLINK      BioProject: PRJNA769689
KEYWORDS    RefSeq.
SOURCE      Antechinus flavipes (yellow-footed antechinus)
  ORGANISM  Antechinus flavipes
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Metatheria; Dasyuromorphia; Dasyuridae; Antechinus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_067400) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_016432865.1-RS_2023_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/25/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6489
                     /organism="Antechinus flavipes"
                     /mol_type="mRNA"
                     /isolate="AdamAnt"
                     /db_xref="taxon:38775"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="testis"
                     /dev_stage="adult"
                     /ecotype="Samford, QLD, Australia"
                     /country="Australia:Samford, QLD"
                     /lat_lon="27.3666667 S 152.86666666 E"
     gene            1..6489
                     /gene="ATP7B"
                     /note="ATPase copper transporting beta; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 7 Proteins"
                     /db_xref="GeneID:127555216"
     CDS             3..3653
                     /gene="ATP7B"
                     /codon_start=1
                     /product="copper-transporting ATPase 2"
                     /protein_id="XP_051843344.1"
                     /db_xref="GeneID:127555216"
                     /translation="

MIDVGRLQDNNPKKMPTHLSCNNIEVCGDQSNPATSLQLRVEGMHCKSCVLNIERNIAGLSGVQNIKVSLENKSADVHFYPAYVTPLSLKQAIKALPPGNFKVTLPKEAEGSGLENSLDKLSSKLPLSTGSQGNQAERMRTTVVIGIEGMTCASCVQSIENLLSQREGVGKVSVSLAERIGTIHYNTSVVSPEELKAAIEDMGFEAFIEEIDVKGCHKRNILGHSPKPFPSEYPLHPKAVPSEKCFLCITGMTCASCVSNIERNLLKEDGILSVLVALMAGKAEVKYNPQTIQPLEIAQLVQNLGFEAIIMEDYTGSDGNIELIVTGMTCASCVYNIESKLTKTNGILYASVALATSKAHIRFDPEIVGPRDIIKIIEGIGFHASLAQKNPNGHHLDHKNEIKQWKKSFLSSLVFGIPVLCLMIYMLIPSSQPHKSMVLEHNLIPGLSVLNLVFFVLCTFVQFLGGWYFYVQAYKSLKHRTANMDVLIVLATSIAYAYSLVILVVAIAEQAEKSPVTFFDTPPMLFVFIALGRWLEHVAKSKTSEALAKLMSLQATEATVVTLDDDNLIIREEQVPIELVQRNDVIKVVPGGKFPVDGKVLEGSTMADESLITGEAMPVTKKPGSTVIGGSINTHGSVLVTATHVGSDTTLAQIVKLVEEAQMSKAPIQQLADKFSGYFVPFIILTSTVTLVVWIVIGFIDFGVVEKYFPSANKHISQTEVIIRFAFQTSITVLCIACPCSLGLATPTAVMVGTGVAAQNGILIKGGKPLEMAHRIKTVMFDKTGTITYGVPKVMRVLLLVDMVSLPLKKVLAVLGTAEASSEHPLGVAVTKYCKEELGTETLGYCMDFQAVPGCGIGCKVSNVEAILGRSKDPLNEQRSRLNGIGSFPTEKGAAASQTYSVLIGNREWMRRNGLTISTDVSDAMTNHEMKGQTAILVAIDGVLCGMVAIADSVKQEAALAVHILKSMGVDVVLITGDNRKTAKAIATQVGINRVFAEVLPSHKVAKIQELQNQGKEVAMVGDGVNDSPALARADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSRRTVWRIRINLILALIYNLVGIPIAAGVFMPLGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKPDMEKYEAQAHGRMKPLTPSQVSVHIGMDDRRRDKVAPWDQVSNISQVSLSSLMSDWGSQDSILGADGGDKWSLLPDDRGNE"

     misc_feature    114..290
                     /gene="ATP7B"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; Region: HMA; cd00371"
                     /db_xref="CDD:238219"
     misc_feature    order(132..140,147..149)
                     /gene="ATP7B"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     misc_feature    441..620
                     /gene="ATP7B"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; Region: HMA; cd00371"
                     /db_xref="CDD:238219"
     misc_feature    order(450..458,465..467)
                     /gene="ATP7B"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     misc_feature    747..926
                     /gene="ATP7B"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; Region: HMA; cd00371"
                     /db_xref="CDD:238219"
     misc_feature    order(756..764,771..773)
                     /gene="ATP7B"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     misc_feature    966..1157
                     /gene="ATP7B"
                     /note="Heavy-metal-associated domain (HMA) is a conserved
                     domain of approximately 30 amino acid residues found in a
                     number of proteins that transport or detoxify heavy
                     metals, for example, the CPx-type heavy metal ATPases and
                     copper chaperones. HMA domain...; Region: HMA; cd00371"
                     /db_xref="CDD:238219"
     misc_feature    order(984..992,999..1001)
                     /gene="ATP7B"
                     /note="metal-binding site [ion binding]"
                     /db_xref="CDD:238219"
     misc_feature    1221..3332
                     /gene="ATP7B"
                     /note="P-type heavy metal-transporting ATPase, similar to
                     human copper-transporting ATPases, ATP7A and ATP7B;
                     Region: P-type_ATPase_Cu-like; cd02094"
                     /db_xref="CDD:319783"
     misc_feature    order(2214..2216,2220..2222,3261..3263)
                     /gene="ATP7B"
                     /note="putative Cu binding site [ion binding]; other site"
                     /db_xref="CDD:319783"
     misc_feature    order(2346..2354,2556..2558,2712..2720,2808..2810,
                     2928..2936,2994..2996,3003..3005,3012..3014,3069..3071,
                     3078..3080)
                     /gene="ATP7B"
                     /note="putative ATP binding site [chemical binding]; other
                     site"
                     /db_xref="CDD:319783"
     polyA_site      6489
                     /gene="ATP7B"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

gaatgattgacgttggaaggttacaggacaataacccaaagaaaatgccaactcacctctcctgtaataatattgaagtctgtggggaccagtccaacccagctactagtctacagctaagagtagagggaatgcactgcaaatcttgtgtcttgaatattgaaagaaatatagctggactgtcaggtgtgcaaaatattaaagtatctctagaaaacaaaagtgcagatgttcacttttacccagcctatgtcaccccactatccttgaagcaagccattaaggctctcccacctgggaatttcaaagtgactcttcctaaagaagcagaaggtagtgggttggagaattcattagacaagttgtcttcaaaacttcctctttctacaggatcccaaggaaaccaagcagagagaatgaggactaccgttgtgattggcattgagggcatgacctgtgcttcctgtgtgcagtctattgagaacttactatcccaaagggaaggggtagggaaagtttcagtctctttagctgaacggattggaacgatccattataatacctcagtagtgagccctgaagagctaaaagctgctattgaagacatgggatttgaggcattcattgaagaaattgatgttaaggggtgtcacaaaagaaacatcttgggccactctccaaagccctttccctcagaatacccacttcaccctaaggcagtgccctcagaaaaatgctttttatgtataacaggcatgacgtgtgcatcctgtgtctccaacatagaaagaaatctactgaaagaagatggtatactttcggttctggttgctctaatggctggaaaagcagaggtcaagtataatccacaaaccatccagcctcttgaaatagctcagcttgtccagaacttgggctttgaagctataataatggaagattatactggctcagatggcaacatcgagctgattgtcacaggaatgacctgtgcttcatgtgtttataatattgaatccaagctgaccaaaaccaatggcattctctatgcctctgtggcccttgctactagcaaggctcacatcaggtttgatcctgaaatcgtgggtcctcgggatattataaaaattattgagggaatcggctttcatgcttccctggctcagaaaaatcccaatggtcatcatttggatcacaagaacgaaatcaaacaatggaagaagtctttcctgtccagtctggtgtttggcatccctgtcttgtgcttgatgatttacatgttgatacctagcagccagcctcacaagtccatggtattggagcacaacctcatccctggattatctgtcttaaatctcgtcttctttgtgctgtgcacttttgtccagttcctaggtggatggtatttctatgtccaggcctacaagtcattgaaacacaggacggccaacatggatgtgctcattgtgctggccacaagcattgcttatgcctactctcttgtgatcctggtggtagccattgctgaacaggcagagaagagtcctgtcaccttctttgatacacctcccatgctttttgtattcattgccctggggaggtggttggaacatgtggcaaagagcaaaacatctgaagcccttgcgaaactaatgtctcttcaagccacagaagctactgttgtgacattagatgatgacaacctaatcatcagggaggaacaagtgcctatagagctggtccaacggaatgatgtgatcaaggtagtccctgggggaaagttcccagtggatggaaaagtcctagaaggcagcaccatggcagatgagtccctcatcacaggagaagcaatgccggtcactaaaaaaccagggagcacagtgattggcggttcaatcaatacacatggttcggtgctagttactgccactcatgttgggtctgacaccacattggcacaaattgtgaaactggtagaggaagctcaaatgtcaaaggcacccattcagcaactggctgacaaatttagtggatattttgtcccattcatcatcctcacttcaactgtgacattggtggtatggattgtaatcggttttatcgattttggtgttgttgaaaaatactttcctagtgctaacaaacatatctcccagacagaagtgatcattcggtttgcattccagacgtccatcacagtattgtgtattgcctgtccttgttctctgggcttggctacaccaacagcagtaatggttggaacaggggtggctgcccaaaatgggattctcatcaaaggaggaaagcccctcgaaatggcacacaggatcaagacagtgatgtttgacaaaactggaaccatcacctatggtgtccccaaagtcatgagagttcttctgctggtcgatatggtttccttacccttgaagaaagttctggctgtgcttgggactgctgaagctagcagtgagcatcccctgggtgtggctgtcactaagtactgcaaagaggaacttggaactgaaaccctaggatactgcatggacttccaagctgtcccagggtgtggaattggctgtaaagtcagcaatgtggaagccatcctgggtcggagcaaagaccctttaaatgaacagagaagtcgtctgaatggtattggcagctttcccactgaaaaaggtgcagcagcatcccagacctactctgtgctgattgggaaccgggaatggatgcgacgaaatggtttgactatatccactgatgtcagtgacgccatgacaaaccacgaaatgaaggggcagaccgccatattggtggctattgatggtgtgctctgtgggatggtggccatagcagattctgtcaagcaagaggcagcattggctgtccatatccttaaaagtatgggtgtggatgtcgttctgataactggagacaacaggaaaactgcaaaagccatcgccacacaggtgggcattaacagagtatttgcagaggtcctcccctctcacaaagtggccaagatccaggagcttcaaaaccaagggaaggaagtggccatggtaggagatggagtgaatgactctccagccttggcgagggccgatgtcggcattgccatcggcacagggacagatgtggctatcgaagccgctgatgtcgtcctcattaggaacgatttgctagatgtggttgctagcattcatctttccaggaggactgtctggagaatacggataaacctgatcttggccttgatttataacctagttgggatacccatcgcagcaggtgtgttcatgccccttggcattgtgctgcagccctggatgggatccgctgccatggccgcctcctccgtgtctgtggtactctcctcacttcagctgaagtgttacaagaaaccagatatggaaaagtatgaagcccaagcccatggccgcatgaagccccttactccctcccaggtgagcgttcacattgggatggatgaccggcgaagggacaaggtcgccccgtgggaccaggtcagcaacatcagccaggtgtcactgtcctccctgatgtcggattggggctctcaggatagcatcctgggagcggatggaggggacaaatggtcactgctcccggatgatcgcggcaacgaatagtccatctgaaagccggcagctgtcgcagagcatcggcagcgcgatcagggtgccgtgtttctcaggagatccatgagttcctacacatataaaaggagggggagaggaattcttttgcttcagctcagctaaataactatagcatcatttctcctttgttgggatgaactgaaatctctggcattgggagcagttctgatacacttatttttggcaacctacggcttttcccagaaacaattttgggcctagggaaagagttctggcccatggcaaccgtcttcaacactgatttggaatacatagggagaaaaccttcagcctccaccatttcatcaagtctgtttttggagaaggaaaaacaatcccctacaaatgggaggaaagccagtgttcctggggtttcccttttatcatttggtatgaatagtagtagtaaaatgtgggaacttacactaggactaaaaagctggccaagcttttctgtagagtctatgtaaaaacttcacatatcatatttttcattaatgcaagtctttatgtttatcatattgttgagtgttggaatctttacaaactgctaattcattagagttgatagattattgatctgatcttacaagaagaagttttgggctagaacctgaaacaagatactaagcagaactaattgatacaatgcttgtgtttgcacctttactcattggagttcacacgtttgggaaatttcagggttttagtatgagatatctgaatttacacctcccttgaagttcttagggccagagagcactatgggagaaaaccccaaatccctctctctcatatcccacaattcctctctctcgtataaaagaagcagacagaggctctcggacagatttcagctgaattacgccataagccctctcccccaagcagttagcctgtctggtcccttccattcaccactttctggatctctccacatcacctggtgattatctaaagatagtggagctgctcgcactggacactgctcttctgatcggttataaaacctttctgctggagccagtgcatctttatcaaagattaaaaaattaatggtatagagaactaaatttagaagttctctagggttacctgttgctcaagggaggtatgaattcacaaagttacacagttaactttgtgaatctctcatacttgtgaactccagtgagtaaaggtgtgaacacaagcattgtatcaattagttctacttagtaccttgtttcaggttctggcccaaaacgtcttcttgtaagatcagatcaataatctatcaactctaatgagttagaagtttgtaaagattccaacagttgagaacacagtttacctcaaaatgtcattttctaacagcacgtgacctctttttcaattctcatctctcctccccctccgctcatcacccctttccctctccggctctcttctttcccaatgcttatattctcttaatttgtggtcatgagcctttggtcctttgttccctacttctggaatccctgtatctgctacagtctgttctgtctcctttctgatgtttctccattctgacttgacaagtgtacttcctggctgaggtggtgcattcatacatatgtgccagatggctttgggtgatgaggaatgcttttgtcacctaaggcccctcaatcattgcttctcactgcagaggagtggggtgcattgttatgtagcagcaagtgctgctgggaacctgagattttaaagcaaattaatatcctctttttctagaggttgtagggccctgtaaaagggcatagtggtgccattctcctaagcccaagacccttttatggtgcttgtgattggcaagcagtagggtgaagagggaagaagaaatgaacattttctgttgaaaacaatgactcaaagtcactgtttaggaaaccttaataaatcatagcctcctcagctatttcatggtctgtggtagacctacatcagccctgccaaaaataggaggaaagtattctgggagagtgagagacaactggaccctctcaaataaaaaatgcacattttttttctattcaacagctactggcaaatggcatccatatcaagaaggcagatggatcttgttttattgtctaagttaatttcctacagctgataattgaaggaaccatatggaagtgggctggtggaaggactccactggtggaaatagttatgtggatcctttagagagtgaaattggaagatttgaaagaataaaaggccatgactaaaagatagtgtgctatttcaagccatgatcaatatttgccaccaaaaaaccattttcaaatgaaaaaaaatttacactctaatttatgggaatatgtgtgctatataaataaatattagttgcactgacattgaattgagttcaaaatgggagtttcatctgttcataggaagcttaattttttccatgttatgggctactttatttccttggagttttttcctctgaaatccagttctattttgttgcctgtcccttttatcctttttcattgttttcctttttcactattgcctctcctcagtaaaaatgtccacttttctaggttaataatgacatcatgatgataattctgttgattttaaaaagctttaaaaaccttaaatgccttgtttatatacacatgaaaatatgtaattgttaaaagaaaaagacctcacaaatgtgcaatagctgaaggattattttggggctgagagaatgtttactatttttgaaatacttagcatgcaaccttaaaataaagttgttagcttctttccatttccaaaa

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