2024-05-16 04:16:20, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_050651721 3091 bp mRNA linear INV 19-SEP-2022 DEFINITION PREDICTED: Diabrotica virgifera virgifera balbiani ring protein 3 (LOC114325198), transcript variant X13, mRNA. ACCESSION XM_050651721 VERSION XM_050651721.1 DBLINK BioProject: PRJNA862183 KEYWORDS RefSeq. SOURCE Diabrotica virgifera virgifera (western corn rootworm) ORGANISM Diabrotica virgifera virgifera Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Chrysomeloidea; Chrysomelidae; Galerucinae; Diabroticina; Diabroticites; Diabrotica. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_065447) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: Diabrotica virgifera virgifera Annotation Release 101 Annotation Version :: 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3091 /organism="Diabrotica virgifera virgifera" /mol_type="mRNA" /sub_species="virgifera" /db_xref="taxon:50390" /chromosome="5" gene 1..3091 /gene="LOC114325198" /note="balbiani ring protein 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 60 long SRA reads" /db_xref="GeneID:114325198" CDS 121..2916 /gene="LOC114325198" /codon_start=1 /product="balbiani ring protein 3 isoform X13" /protein_id="XP_050507678.1" /db_xref="GeneID:114325198" /translation="
MDCCKKGESLKIVKQCKFIKQDGTEVDCECTCTCICESDCQGCSGKNCCNCECSEKTAKLGADGKYRCICECACSSQKKDCCNQGESCKIVKQCKFTKQDGTEVDCECICTCTCESDCQGCSGKNCCNCECSEKTAKLGADGKYRCLCECKRSSQKKDCCKKGESCKIVKQCKFTKQDGTDVDCECTCTCLCENDCQGCSGKNCCNCECSEKTAKLGADGKYRCICECACLSQRKDCCKKGESCKIFKQCKFTKQDETEVDCECTCTCVCENDCQGCSGKNCCSCECSEKTAKLGADGKYRCICECACSSQKKDCCKRGESCKLVKQCKFTKQDGTEVDCECTCTCVCENDCQGCSAKNCCNCECSEKTAKLGADGKYRCICECACISQKKDCCKKGESCKIVKQCKFTKQEGTEVDCECTCTCLCENDCQGCSGKNCCNCECSEKTAKLGADGKYRCICKCACLSQRKDGCKKGESCKIFKQCKFTKQDGTEVDCECTCTCVCENDCQGCSGKNCCSCECSEKTAKLGADGKYRCICECACSSQKKDCCKKGESCKIVKQCKFTKQDGTEVDCECTCTCLCENDCQGCSGKNCCNCECSEKTAKLGADGKYRCICKCACFSQRKDCCKKGESCKIFKQCKFTKQDGTEVDCECTCTCICENDCQGCSGKNCCSCECSEKTAKLGADGKFRCICECACSSQKKDCCKKEESCKIVKQCKLTKQDGTEVDCECTFTCVCENDCKGCSEKKCCNCECSEKTAKLGVDGKYRCTCECECSSQKKDCCKQRQSCKIVKQCKFKQDGTEVNCECTCTCIDEANCQGCSEKNSCSCECSEKTVQLGADGKYRCTCECKCSSQRKDCCKKGESCKIVKQCKFTKQDDTEVDCECTCTCVCECDCQCCPGKNRCNCDCSEKTAKLGADGKYRCTCECTC"
polyA_site 3091 /gene="LOC114325198" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
ggtatctactataaaaccaaaaccgagatcaccgtcctacattctgactcagattgtagttatcaaaacaatacgtaataattgaaagtgacgtagtttgtttatatattgctaacgaaaatggattgttgcaagaaaggagaatcacttaagattgtcaaacaatgcaagttcattaagcaagatggcactgaagtagattgcgagtgcacctgcacatgcatatgtgaaagtgactgccaaggctgctctggaaaaaattgctgtaactgcgagtgctctgaaaaaactgccaaactaggagcggatgggaaataccgatgcatatgtgaatgtgcatgcagctcacagaaaaaggattgctgcaaccaaggggagtcctgcaagattgtcaaacaatgcaagtttactaagcaagacggcactgaagtagattgcgaatgcatctgtacatgcacatgtgaaagtgactgccaaggttgttctggaaaaaattgctgtaactgcgagtgctcggagaaaactgccaaactaggagctgatggaaaatatcgatgcttatgcgaatgtaaacgtagctcacagaaaaaggattgttgcaagaaaggtgaatcctgcaaaattgtcaagcaatgcaagtttactaagcaagatggtactgacgtagattgcgaatgcacttgcacatgcctatgtgaaaatgactgccaaggctgttctggaaaaaattgctgtaactgcgagtgctctgaaaaaactgccaaactaggagcggatgggaaataccgatgcatatgtgaatgtgcctgcctctcacagagaaaggattgttgcaagaaaggagaatcctgcaaaattttcaagcaatgcaagtttaccaagcaagatgaaactgaagtagattgtgaatgcacttgcacatgcgtatgtgaaaatgactgccaaggctgttcaggaaaaaattgctgtagctgcgagtgctctgaaaaaactgccaaactgggagctgatgggaaatacagatgcatatgtgaatgtgcatgtagctcacagaaaaaggattgttgcaagagaggagaatcctgcaaacttgtcaagcaatgcaaatttaccaagcaagatggaactgaagtagattgtgaatgcacttgcacatgcgtatgtgaaaatgactgccaaggctgctctgcaaaaaattgttgtaactgcgagtgctctgaaaaaactgccaaactgggagcagatgggaaataccgatgcatatgtgaatgtgcatgcatctcacagaaaaaggattgttgcaagaaaggagaatcctgcaaaattgtcaagcaatgcaagtttactaagcaagaaggtactgaagtagattgcgaatgcacttgcacatgcctatgtgaaaatgactgccaaggctgttctggaaaaaattgctgtaactgcgagtgctctgaaaaaactgccaaactaggagcggatgggaaataccgatgcatatgtaaatgtgcatgcctctcacagagaaaggatggttgcaagaaaggagaatcctgcaaaattttcaagcaatgtaagtttaccaagcaagatggaactgaagtagattgtgaatgcacttgcacatgcgtatgtgaaaatgactgccaaggctgttcgggaaaaaattgctgtagctgcgagtgctctgaaaaaactgccaaactgggagctgatgggaaatacagatgcatatgtgaatgtgcatgtagctcacagaaaaaggattgttgcaagaaaggagaatcctgcaaaattgtcaagcaatgcaagtttactaagcaagatggtactgaagtagattgcgaatgcacttgcacatgcctatgtgaaaatgactgccaaggctgttctggaaaaaattgctgtaactgcgagtgctctgaaaaaactgccaaactaggagcggatgggaaataccgatgcatatgtaaatgtgcatgcttctcgcagagaaaggattgttgcaagaaaggagaatcctgcaaaattttcaagcaatgtaagtttaccaagcaagatggaactgaagtagattgtgaatgcacttgcacatgcatatgtgaaaatgactgccaaggctgttcaggaaaaaattgctgtagctgcgagtgctctgaaaaaactgccaaactgggagctgatgggaaattcagatgcatatgtgaatgtgcatgtagctcacagaaaaaggattgttgcaagaaagaagaatcctgcaaaattgtcaagcaatgcaagcttaccaagcaagatggcactgaagtagattgcgaatgcactttcacatgcgtatgtgaaaatgactgcaaaggctgttctgaaaaaaaatgctgtaactgtgaatgctctgaaaaaacggccaaactaggagttgacgggaaataccgatgcacgtgtgaatgtgaatgcagctcacagaaaaaggattgctgcaagcaaagacaatcctgcaaaattgtcaagcaatgcaagtttaagcaagatggcactgaggtcaattgcgaatgcacctgcacatgcatagatgaagctaactgccaaggctgttctgaaaaaaatagctgtagttgcgagtgctctgaaaaaactgtccaattaggagctgatggaaaataccgatgcacatgtgaatgcaaatgtagctcacagagaaaggattgttgcaagaaaggagaatcctgcaaaattgtcaagcaatgtaagtttactaagcaagacgacactgaagtagattgcgaatgcacttgcacatgcgtatgtgaatgtgactgccaatgttgtcctggaaagaacagatgtaattgcgactgctctgaaaaaactgccaaactgggagctgatggaaaataccgatgcacatgtgaatgtacttgttagttttaaattattttatttttacagtataatatctgttgtcgttgtaattcgtaatgattataaagactttaaatactacgcttgagtctaattaaaagtctggaattatcttaaatagccataaaaaaaataatttttcatttgtacacattaagtaataaattgttatatagat
//
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@meso_cacase at
DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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