2024-05-19 06:06:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_045604823 18736 bp mRNA linear INV 24-DEC-2021 DEFINITION PREDICTED: Harmonia axyridis uncharacterized LOC123671129 (LOC123671129), mRNA. ACCESSION XM_045604823 VERSION XM_045604823.1 DBLINK BioProject: PRJNA788959 KEYWORDS RefSeq; includes ab initio. SOURCE Harmonia axyridis ORGANISM Harmonia axyridis Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Cucujiformia; Coccinelloidea; Coccinellidae; Coccinellinae; Coccinellini; Harmonia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_059501) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Harmonia axyridis Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 1% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..18736 /organism="Harmonia axyridis" /mol_type="mRNA" /db_xref="taxon:115357" /chromosome="1" gene 1..18736 /gene="LOC123671129" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 long SRA reads, 1 Protein, and 99% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:123671129" CDS 301..18624 /gene="LOC123671129" /codon_start=1 /product="uncharacterized protein LOC123671129" /protein_id="XP_045460779.1" /db_xref="GeneID:123671129" /translation="
MRCIIYKELLIFISILHISQEIKDLLEDLQTSDDNPIDLNAFFEDVIKFKKAFKMIRRASAESQADNTLSRDRRERDIDEYVYDEDNFVTSNKKLNNEKYSPPINRVSSIHKSNRPLNDIYPHIYKDHSDQHYLDKYLDNFDIDKGVRYRRQLAEDVEVDPKSTKGNIDILDRKRVINLGNNAELMENDAHEALMTIFNQLGRSTHPTYARITPAPKRELFLSKNSDFKNTNDEPVNIVLTTTESSEPSSTIKREIAVNTQREKSKRDLNLGMNKGKKCKTYSFDNNDNIPFDQPTHANIFRNILQPTHIRNAHDSRSNNYLMHTIGHDGTKEDSNLINNFMKLKEPETISELKRAFISSESLQNIPRFVENIIDQVQKNYGSDDEFSRSNSQNQYRSCMDPEYIQDPGSMIHNENLRNMIHNEPYYTKAINGNMKPMRFKREFPIMQTLVDSNIYPSRSLKFIDSIAEPSQKNEKKFGKIYNMINEDDSAKYSTIGIELSTTTSTLTTTTSTLTDTPTQKTSVELNEDSSSTSDKLYSAITLPTVLMTTTLLLKNSTSSTKAINYNMSMNTEMNRIIETSRTEKNNKIDKTKYIFHLKEKENSKNTKGYIADTFNHTYDPKCTRIRYMDRICSFRNSKAMCNSLSNTNTIDQKNFGMKMNGVPETIDLRNDKNNFLDYCNCICSRKLMNSYDFTTNKHIIQKRDVIDGKEDDEINEPTEIIEKRTESDYGEEPDLSEGQNFKKHSKLKKYSRVMAPCRNFEDNYEYEEAPIEKSYFLESKKSCYPKKKCKKKKFKLQKTDHHSCQVSFREKLAKLKNKLFSSQPDESEKALHDEIPFFGRYDGNIRSERQSEPTSFSEQDYSFYGPSRRIESADADLENKRQLCDPCWNSCDPNTFCLPCQPLPDPCHCSCESCSLDPCSCQSCSCDPCCYDSRVCESAPCHCPEDLCSNRLCNTCHPCPSCRESGPSSYILNKCESVSCPCDPYESTPNPYPQLCKESPGLSSAGLTKKEFCSRDISSPIYSESTSCSSPCIYPPLQSYPCPTASPHVKENDKINTDDYSEDHVVSERSPDTYSKSDSSFHKRGYRKGNALNRRCEPCSCPYPCSSTPCLYPDICSCKSCPCVLEPCPCSNKPFLCSCDSCANPCSCPCSLPCGLRSDVSFTAPTENEVHKIRERNSEMNHPEQFPSKIFTSSPYFCSPNYMQSCKESENDQEFHSHGIRDRCILSCCEPLPCTCTCPCPCPCPCPCPCPCPCPCISHLVKRELEKKDSHGSKDCFLNPFSHKSNSHDIEDRCTSSDFGQIPDWYSCSCHSNPCFSSFRYFAPCSNYLSNHLMKRDFEGSYSSHSLKDRSLSCPSCCELMSALCSPPCSCPYSCLCSSTCLCPSPCICPSPCPCPCPCPCPCPCSCPCPCPCSCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCSCPCPCPCPCPCICPSPCPCSCSCPCPCACPSCPCTCPMKREFEHTKSNEPSKRYIESSNRHDIIDRCVPFSSCCDPILLPCPYPCPCPCPCLYPCPSSDYYSDHRTKREFESSKSHTPMKQSVESSSEENWVRGITDRCLPCSSCCEPISCPCPYSCPCSCPCPCSCPYSCSSACPCSCPCSCPCSCPCPSPCPYPCPSTCLHSDHSTKRETEFSKCQKPVKRSVGSFSQEFWSHDMTDRCLPCSSCCEPIPCPDPCPCSCPCSCPCSCPCPCPYPCPCPCPYAHPSYNDDQNHQTKRDFENSEDHEPVEGSDETSGQEYSARDISHRCLSCPSCCETMPCPYPFPCSCPCPCPCPCPCPCPCPCPYACPSCSSHDYYNDQPINRAFESSEPHESEERYVRSLNEDNWSHHMTDRCLPCSSCYDQLACPVPCTYPCPCSCSSNYQSDQLTRRESESSKSHNPVLRSEGAYSKEFGSHDITDRCLPCPSCCESIPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCPCLCACTYECSRSLPDYPSDQLDKGRTGITETHKPMDRSVEFSKQRNWCHDITDRCLPCPCPCSCPSPCPSPCPCPFPCPYSCSSASNYRSDHKTKREIESSESNKPVELSVETSCQKYGSHDITDRCHPCLSCCEQLPCSCPCPSPCTCPCPCSCSCPLPCSCPCSCPCSLPCPCSCPCSCPCPCPCSFPCLCPVSEFHNDNLKKREIEDSKSQKAMGVSGGSSTQEFRSHDITDRCLPCSSCCETIPCPCPCPCSCPCPLPCPCPCPFPCLCPSTNFHNIHLQKREIESSESQKPVERSKESSTREIWSHDITDRCLPCSCCCEPIPCPCSCSCPCPSPCPCPFPCPCSCPCPCPCPCPCPCPCPCSCPCLYSASNFQDNHLKKREIKSYKFLESEQRSVGPFSQKFWSHDITNRCLPCSSCCEPIPCPCSCSCSCPCPCSCPCPCSCPCPCPCPCPCPCPCPCLCSPANFQNNHLTKREIESSRSHKSGQRSQGSTSQEYWSHDITNRCLPCSSCCEPIACPCPCSCPCPCSCPCPCPCPCPCPCPCPCPCPCPCPCPCPCLCSPANFQNNHLTKREIESSRSHKPVQRSQGSTSQECWSHDITNRCLPCSSCCEPIACPCPCSCPCPCSCPCPCPCPCPCPCPCACPCPCPCPCPCPCQSPCPCPCLRSSSSNFRNDHLKKREIESSKSHKPVERSEGSSTQESWSHDITDRCLPCSSCCEEIPYPCPCSCPCTSPCPCPCSCPCPCPCPCPCQCPCPCPCPCSCPCLCPAPNFQNNNLKKRKIESSKFHKLEQRSIGPSSQELWSHDITDRCLPCSCCCEPIPCPCSCSCPCPCPCPCPCTCPSPCPCPCPCSCPCPCPCLCPCLCSTSNFQNNNLNKREIKSSESDKTLQLSEGSSSQEDWSHDLTDRCLPCSSCCEPIPCPCPCSCSCPCPCPCPCPCPCPCPCTCPCPCPCSCPCLCSSSNFHNDHLTKKEIESFKSHEPIEKSEGSSSQEFWSHDIADRCLPCASCCEAIPCPCPCSCPSPCPCSCPCPSTCSYPCPCPCPCPCPCPCLCSSSNFHNNLLKKREIESSKSHEHVDRSVGSSNHEYLSHNIADRCLSCSSCCEPILCPCPCPCPCPSSCPLPFPCPWSCPCVCPSSNLDNYHLKKRGIESSKSHKTVERSEGSSSGEFCSHDIIDRCLPCSSCCESIPCPCSCSCPSPCPYPCSCPYPCSLPCSLPCSCPCLCPSSNIHNIHLKERETESSKSHKPVERSEGSSSQVFWSHDITNRCLPCSSCCEPISYPCPCSCPCPCPCPCSCPCPCPCSCSTPCPCPCSFPCLCPVSEFHNDNLKKREIESDKSFKPVQRSKKSSSEEFRSHDNFVRCLPCSSCCDPITYPCPCSCPCPCPCPCPCPCPCPCPCSCSCPSPCPCPCCCPCLCPASNFCQKRENVFGRSRKPVQLSEGSSSQEFWSHDITDRCLPCSSCCEPICPCSCPCPCPCPCSCPCPCPSPCPGPCSCPCISPASNFHNDHLKKREIKSFKSHEPVQRSEGSFSQVFRSHDITDRCLPCSCCCEPIPCPCPCSCSCPSPCPCPCQCPCPCPCSCPNPLPCPCPCLCSPANFQNNHLTKRENEFSRSHKPVERSVGSSCQEFWSHDITDRCLPCSSCCESIPCPCTCPCPCTWSCPCPCPCPLPCPCPCLCSSSNFHNDHLTKREIEYSKSHKPMELSVGFSSRDFGSPDSFDRCLSCTSCCEPISCPCPCPCSHPCLRAVSNFHNHLTTSEIESSKFYKPVERSEESSNRKYWSHSRANRCLPCSPCCDPIPCPCPCPYPSTCPCPCPSSCPCAGPCPSYNSRSNHLSKRRIESSKSHKPVEQSVGYSSEEFLSHDNTDRCLPCQSCCEPIPNPCTCNCPYPCPCPCPSPCPCDYSSRCPFSDYHSDHRMNREIESSKAHKLIKRSEESSSRDILSHDITNRCLPCSSCCEPISCSCPCSCPCPCSCPCPCPCPCPCPCPCPCPCPCPCSYAFPSFDYHNNHPEKREIQSSKSHKPVERSVDSSSRDCWSHDITERCLPCPSCCEQIPCPGPCPCPCPCSSSCPCPCPCPCSCPCPCPCSCPYPCSCPAFNHPIKRHFEFHEPMELYEGASNRDNWSHDKTNRCVPCSSCCEQIPCPCPCSCPCSCPCSYPCSGPCPCPCPCLSPSSCPFSNCQIDHPSKREFESFSPCEPLEGYVAASCQDYGSHDITDRCIPYHSCSKPMLCPCSYHCSSPCAYPYSCSFFNLHSDHPTKRHFESSDSHQPLERSVGVSGQEYQSHDITDRCLPCCEPLPLPSTCTCPCSFPCPCSCPCPCPCPCSCISPSSDTYICPSSNYHRDLKQSSSISSEQGNLHFIEDRCLPNPSCCEPIPLPSSCPCSCPCGYPCSSSCSDFQIAHRVKRKFESGESHKIVEPSQKPSALKYCLNDMKKRHTILNCEPTTSPFVSSCFCPCPSSCPGTCPYPCSYPCPCPCCSPSARKALETNKFHNVEERSISSSTKNPSEVVKEDRCANSCDCCSYPCNSCSCACSCSCPFPCDPLICPPPYQFSPPCGCLSPFDVCLSPDELCSYSYPCSPYQCSKSCSLLCSCLDAIKREIKTKFHRIKNRCPLVSYDPISYACPHSASCPCPSCYSCLPSCDFICCERCRHIYLYPCSDFHSHICPCAAYYHCSCPYTFSCICSAPALSSCSNCYIRSISDTPDKLRYHEIRNRCSYPPCDSQHPFPLLCPYTHPYPSSQPCSCPLLSFIMDNNRQQKDQEININSQNKRMFNPSEFKDFESGDHKIVKRCCPDCTPWCCSQSVALEPCFFGRDDRSSSQDHKTIISKLEKVHSRAVEPESNLQEDDKFHGITECSEPRSCSPGYKFRSDNQCFYPVSCSSTTRSSGDNHEAEHLIMKRSSHCEDEDMEMSDVMNGYNKEKKLLNNEPRGVREDQICPKYHIRSYPQHYFSIMKPYHQSFTAPVEKRDQETEIFKNQRYSYPDLISYYTSMSPECFHPMIHTYHTTCPNDCSASHSIFRINSPHNIKKRLCVPFTYLWIEPFCPFPCTYPEIHCTCPDIVCPSCTCNCPVSCIPVKNVCRQCQSSHPNMYEPHFITKRKTSEHSTVFPKIEESKLIKMCTSEYPFSFTPSTSCSCYYPISYQCSLPGLCGLSCPCYKTNDIGEYSEESEDKRFGRCLPQCDFCDPYFCNPYHFNCNQYSCSCPCSSICLPTCASPCPCPSIYPYIISCCMSCKRQIRNLPSNPRLNERCVFGFLHFPSPCSQNLCNPFRTCKICDPCSNCRSCKCGSCGNCPCDFYNCDWPCKRESQKESNHRIEERSPCCCSQDPCRTICIHSYPELSLPNCWGTCCCSPYRDCSPTSIPGSFPCPEVCCQIPELCPLPCSSHFPYSPVPCTINYGIPCPCTYLSKRCCSSPSSYPVYISGQFSDRMKRNRLCPKFLNDIPKSKQLRDCLDCCTPPYCIESISFNDPFSCFEPVCQLPFCTRNCICGCNCDESESNRIEPYCPDPCAVSKPCFQCCQESDFPCPPWYWNCNIIGPCRYKCNSENTRVPLQRRSNILQPSIILPSSASASDLIASSNFKTDTENKEKRKCPKPCEPLPPCPACPPACPLPCDDTANDMLVQKARQVNDRLKNEYLSGRYIINNQVIPRNRRQLSSVENSIQARQPHQDSSDRQNEELNYLGNNMKENSPDEFKEPENIFKSSNDGFDEDDVISQIGKIRRRNCQKDCNTESCCRSELNPEDFMLLRKKSNSEYQDMHFAKEIVEAIMNKVNKNTNLKIKIGNALNKKRIYETENNQRNYAKVCSFEERAEYEEAKNLLRSVSCVLNKLVKRQIEEKLCERLPSHLKNFLKRIVRPPKHRISSRHDDKYHEDTFLFRASCPPARLDPDLRSQLEVNLVKLLDQYNQLDEDSRKRAAPLKSYIANHLNMLKKIDDETYHTENAAANSENYMETNDMPQIRTRSNSDDLGLDNSVNTRISANNLDTIEKDLENIDLYKKRNSFQNPLFNLNNFPPLKIEENNFIRPKLRKRNINNLVDKFKISTEKKTDDDLSSDNYKKLVKASEEIRFKRKNDEKIGETFGNKKSVENNLNAKEDEDEVAFETPLIYRT"
polyA_site 18736 /gene="LOC123671129" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
aatctattcagagaatttttactattgccaattgtctcgatcagttatttgattatttccataatcattatggagattatataaatcattaaaagattctcagcaggaaaaattttgaatgaaagtgatttttggaaatgaaaatttttgccctcatgtgacaaattaacgtactttgaaaagggctaacttctctagacgtttatcaaaatatgacaaccttgtcatgtcataaaaagtagttctctcagtgaattagacttctatctgctttatttgataatcaggaatttcactgtcatgcgatgtattatatacaaagaactcctgattttcatatcgattttgcatatttctcaagaaattaaggatctactagaggatttacaaaccagtgacgacaaccctattgacctcaatgcatttttcgaggatgttataaaattcaagaaggcattcaaaatgataagaagggcatccgccgagagccaagctgacaacactttgtccagggatcgaagagaacgagatattgatgaatacgtatatgatgaggacaattttgtgacaagtaataagaaattgaataatgagaaatattcaccgcctattaatagagtctcgtcgatacacaaatcaaacaggccattaaatgatatttatccccatatttataaggaccattcagatcaacattacctggataaatatctagataatttcgatatcgataagggtgtacgttatcggcgtcaattagcagaagatgtcgaagttgatccaaaaagtacaaagggcaacatagatattctggataggaaacgagttatcaatttaggaaataacgcggaattgatggaaaatgatgctcatgaagctctcatgactatttttaaccaattgggacgatcaacacatccaacatatgcgagaataaccccagcccctaaaagagagctatttctctccaagaattcagatttcaagaacaccaacgatgaaccagtcaatattgtcttgaccacaacagaatcttcagaaccatcttcaaccataaaaagagaaatagcagttaatacacaaagggagaagagcaaaagagacctaaaccttggtatgaataaaggcaaaaaatgcaaaacttattccttcgacaacaatgacaatattccattcgatcaacctactcatgctaatatttttcgaaatattcttcaacctacacacattagaaatgctcacgacagtagatcaaataactatttaatgcatactatcggacatgacggaactaaagaagattccaatcttatcaataattttatgaaattgaaagaaccagaaactatttctgaattgaaacgagctttcatatcatctgagtctctgcaaaacattcctagatttgtggaaaatattattgatcaggttcagaagaactatggtagtgatgatgaattttcaagatctaattctcaaaatcaatatcgatcttgtatggaccctgaatacattcaagatcctggaagtatgattcataacgaaaatttaaggaacatgattcataatgaaccttactacacaaaagcaattaatggaaatatgaaaccaatgagattcaaaagagaatttccaatcatgcaaactcttgttgatagtaatatttacccatctagaagtttgaagttcattgattctattgcagagccatctcaaaaaaatgagaaaaagtttggtaagatatataatatgataaatgaagatgactctgcaaaatattcaactattggaatagaattatccacgacaactagtacattgaccacgacaactagtacattgaccgatacacctacacaaaaaacatcagtagaattaaatgaagactcaagttcaacttcagataagctctattctgcaataacacttcctacagtcctgatgacaaccactctgttactcaagaattcaaccagcagtactaaagccataaattataatatgtcgatgaatacagaaatgaatcggatcatagaaacaagcaggacagaaaagaataacaaaatcgataaaacaaaatatatttttcatttgaaagaaaaggaaaattcaaaaaatacaaagggatatatagcagatacattcaatcacacttatgatccgaaatgtactaggataagatatatggatcgtatttgttcattcaggaatagcaaggcgatgtgcaattctttatcgaatacaaatactatcgatcagaaaaattttggcatgaaaatgaatggtgtaccagaaactattgatttacggaacgacaaaaataattttttggattattgcaactgtatttgttccagaaaattaatgaacagttatgattttaccactaataaacacatcatacagaagagagacgttatagacggtaaagaagatgatgaaataaatgagccaacggaaattatagagaaacgaacggaatctgattacggagaagagcccgatttatccgaaggtcaaaatttcaaaaaacattcgaaattgaagaagtacagtagagttatggctccatgccgaaattttgaagataattatgagtacgaagaggcacctattgaaaaaagttattttctcgaatcgaaaaagagctgctacccaaaaaaaaaatgcaaaaaaaaaaaattcaaactacaaaaaactgatcaccattcttgccaagtatcatttagagaaaaactagcaaaattgaaaaataaacttttcagtagtcaacctgacgagtcagaaaaagctttgcatgatgaaattcctttttttggtagatatgatggcaacataaggtcagaaagacaatcggaacccactagtttcagtgaacaagattatagtttttatggtccttcaagaagaatagaatctgctgatgctgatttagaaaacaaaagacaactttgtgatccttgttggaactcttgtgatcccaacacgttttgtttaccttgtcaaccattgcctgacccttgtcattgttcgtgtgaatcgtgttcattggatccttgttcttgtcaatcatgttcttgtgatccttgttgttatgattcccgtgtatgcgaatctgccccttgtcattgtccagaagacctatgctctaatcgtttgtgtaacacttgccacccctgcccatcatgccgtgagtcaggtccaagttcttatattcttaataagtgcgaatcagtttcctgcccttgtgatccatacgagtcaactcctaatccttatcctcagttatgtaaggaaagtcctggtttgagttcagcaggattgacaaaaaaagaattttgttcaagagatatatcctcacccatatatagcgaatcaacttcttgctcatcaccttgtatttatcctccacttcaatcttatccctgcccaactgcttcacctcatgtgaaagaaaatgataaaattaatacggatgactattcagaagaccacgttgttagtgaacgttcaccagatacctattcgaagtcagattcttcatttcataagagaggatataggaaaggtaatgccttaaatcgtcgttgtgaaccatgttcatgtccttatccctgttcgtctacaccttgcttatatccagatatatgttcctgcaaatcatgtccctgtgttcttgaaccttgtccatgttcaaataagccttttctatgtagttgtgattcttgtgcaaatccttgttcatgtccttgttccttaccttgtgggcttcgttcggacgtttcattcacagcaccaacagaaaatgaagtacataaaatcagagaacgcaactcggaaatgaatcatccagaacagtttccatcgaaaattttcacctcttctccatatttttgttcacctaattatatgcaatcctgcaaagaatcagaaaatgaccaagaattccactcacatggtataagagaccgttgtatcttatcttgttgcgaaccattaccttgtacttgcacctgtccttgtccttgtccttgtccttgtccttgtccttgtccttgtccatgtccatgtatttctcatctggtgaaaagagaactagaaaaaaaggattcacatggcagtaaggactgtttcttgaatcctttcagtcataaatcaaactcacatgatattgaagaccgttgtacctcttctgattttggacaaatacctgattggtattcttgttcttgccattccaatccttgtttttcttcttttcgttattttgctccttgttctaactatctcagtaaccatctaatgaaaagggattttgaaggatcatattcttcacattctttgaaagaccgaagtctttcttgtccttcttgttgtgaattgatgtctgcattatgttctccaccttgttcatgtccatattcttgtctttgttcaagtacttgtttatgtccctctccatgtatttgccctagtccatgcccatgtccatgcccatgtccatgcccatgtccatgctcatgtccatgcccatgtccatgctcatgtccatgcccatgtccatgcccatgtccatgcccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgcccatgtccatgctcatgcccatgtccatgcccatgtccatgcccatgtatttgtccaagcccttgtccttgttcatgttcatgtccatgtccttgtgcatgtccttcatgtccatgtacttgtcctatgaagagagagttcgaacacaccaaatcaaatgaaccctcaaaacgatatattgaatcttccaatcgacatgatataattgaccgttgtgttcctttttcctcttgttgcgatccaattcttttaccctgtccttatccttgtccttgtccttgtccttgcctctatccttgtccttcttctgattattacagtgatcatcgaacaaaaagggaatttgaatcttcaaaatctcacacacccatgaaacaatcagttgaatcctccagtgaagaaaattgggtacggggtataaccgaccgttgtcttccttgctcctcctgctgcgaaccaatatcttgtccttgcccttattcttgtccatgttcttgtccttgtccttgttcttgtccttattcttgttctagtgcatgtccttgttcttgtccatgttcttgtccatgttcttgtccttgcccctctccatgtccttatccttgtccatctacttgtcttcacagtgatcattcgacaaaaagagaaaccgaattttcaaaatgtcagaagcctgtgaaacgatctgtaggatctttcagtcaagaattttggtcacatgatatgaccgaccgttgtcttccttgttcatcatgttgtgaaccaatcccctgtcctgatccttgtccttgttcatgtccttgttcatgtccttgttcatgtccttgtccttgcccttatccttgtccttgtccttgtccttatgctcatccttcttataatgatgaccagaatcatcagacaaaaagggatttcgaaaattcagaagaccacgagcccgtggagggatccgatgaaacatctggtcaagaatattcagcacgtgatataagtcaccgttgtctttcttgtccatcttgttgtgaaacaatgccttgtccttatcctttcccttgttcttgcccttgtccttgtccttgcccttgtccttgtccttgcccttgcccttgtccctatgcttgtccttcttgttcatctcatgattattacaatgatcaaccgataaacagggcattcgaatcatctgaacctcatgaatccgaggaacgatatgtaaggtcattaaatgaagataattggtcacatcatatgaccgaccgttgtcttccttgtagctcctgttatgatcaattagcctgtcctgttccttgtacttatccatgtccatgctcttgttcttctaattatcagagtgatcagctaacaagaagggaaagcgaatcttccaaatctcataatcccgtactaagatctgaaggagcttacagtaaagaatttgggtcacatgatattactgatcgatgtctcccttgtccttcctgttgcgaatcaataccctgtccatgtccctgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgcccatgtccttgtccatgtccttgtccatgtctttgcgcttgtacttatgagtgttctcgttcattacctgattatcccagtgatcaacttgacaaaggaagaaccggaattaccgaaacgcataaacccatggaccgatctgtagaattttctaaacaaagaaattggtgtcatgatataacagaccgttgtttaccttgtccttgtccttgttcttgtccatctccttgtccttctccttgtccttgtccttttccttgtccttattcttgttcaagtgcgtctaattataggagtgatcataagacaaaaagagaaatcgaatcttccgaatccaataaacccgtggaactatcagtagaaacttcttgtcaaaaatatgggtcacatgacatcaccgaccgttgtcatccttgcctctcctgttgcgaacaattaccttgttcttgtccttgcccttctccttgtacttgtccatgtccatgctcttgttcttgtccattaccttgttcctgtccatgctcttgtccttgttcattaccttgtccatgttcatgcccttgttcttgtccttgtccatgtccatgctcttttccttgtctttgtcctgtttctgagtttcacaatgataatctgaaaaagagggaaatcgaagactccaaatctcaaaaagccatgggagtatccggagggtcttccactcaagaatttaggtcccatgatataaccgaccgttgtcttccttgttcatcttgttgtgaaacaataccatgtccttgtccatgtccatgctcttgtccttgtccgttaccttgtccatgtccatgcccttttccttgtctttgtccttctactaatttccacaatattcatcttcaaaaacgagaaatcgaatcttccgaatctcaaaaacccgtggaacgatctaaagaatcttccactcgagaaatttggtcacatgatatcaccgaccgttgccttccttgttcatgttgttgtgaaccaattccctgtccttgttcatgttcctgtccttgcccatctccttgtccatgtccatttccatgtccttgttcatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgctcttgtccttgtctttattctgcttctaattttcaggataatcatctgaaaaaaagagaaatcaaatcatacaaatttcttgaatccgagcaacgatctgtaggaccgtttagtcaaaaattttggtctcatgatatcactaaccgttgccttccttgctcatcttgttgtgaaccaatcccctgtccttgttcttgttcatgttcgtgtccatgtccttgttcatgtccatgtccatgttcttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtctttgttctcctgccaattttcagaataatcatctgacaaaaagggaaatcgaatcatccagatctcataaatcaggacaacgatctcaaggatccaccagtcaagaatattggtctcatgatattaccaaccgttgtcttccttgttcatcttgctgtgaaccaatcgcctgtccttgtccttgttcatgtccatgtccatgttcttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtccatgtccttgtctttgttctcctgccaattttcagaataatcatctgacaaaaagggaaatcgaatcatccagatctcataaaccagtgcaacgatctcaaggatccaccagtcaagaatgttggtctcatgatattaccaaccgttgtcttccttgttcatcttgctgtgaaccaatcgcctgtccttgtccttgttcatgtccttgtccatgttcatgtccatgtccatgtccatgtccatgtccatgtccatgtccttgtgcttgtccttgtccatgtccttgtccctgtccatgtccttgtcaatctccttgtccatgtccttgtcttcgttcttcgtcttccaatttccgcaatgaccatctaaaaaaacgagaaatcgaatcttcaaaatctcataaacccgtggaacgatctgaaggatcttccactcaagaaagttggtcacatgatataaccgaccgttgtcttccttgttcatcttgttgtgaagaaatcccctatccttgtccttgttcttgtccttgcacatcgccttgtccatgtccttgttcatgtccttgtccatgtccttgtccatgtccttgtcaatgtccttgtccatgtccttgtccatgctcttgtccttgtctttgtcctgcccccaattttcaaaataataatctgaaaaaaagaaaaattgaatcatccaaatttcataaactcgagcaacgatctattggtccttccagtcaagaactttggtcgcatgatatcaccgaccgttgcctaccttgttcatgttgttgtgaaccaatcccctgtccttgttcttgttcctgtccttgtccatgtccttgtccatgtccttgcacttgtcctagtccatgtccttgtccatgtccttgttcatgtccttgtccttgtccttgtttatgtccttgtctttgttctacttccaattttcaaaataataatctaaataaaagggaaatcaaatcatccgaatctgataaaactcttcaactctctgaaggatcttccagtcaagaagattggtcgcatgatttaaccgatcgatgtcttccttgttcatcttgttgtgaaccaatcccttgtccatgtccttgttcatgttcttgtccatgtccttgcccatgtccttgtccttgtccatgtccttgtccatgtacttgcccatgtccttgtccttgttcatgtccttgtctttgttcgtcttccaatttccacaatgaccatctgacaaaaaaagaaatcgaatctttcaaatctcatgagccaatagaaaaatccgaaggatcttccagtcaagaattttggtcacatgatatagccgaccgttgtcttccttgtgcatcttgttgtgaagcaatcccctgtccttgtccttgttcctgtccaagtccatgtccttgttcatgtccttgtccgagtacttgttcatatccatgtccatgtccctgtccatgtccttgtccatgtccttgtctttgttcttcttctaatttccacaataaccttctgaaaaaacgagaaatcgaatcttccaaatctcatgaacacgtggatcgatctgtaggatcttccaatcatgaatatttgtcacataatatagccgaccgttgtctttcttgttcatcttgttgtgaaccaatcctctgtccttgtccttgtccttgtccgtgtcctagttcttgtcctctaccatttccatgtccatggtcttgtccttgtgtttgtccttcatctaatttagacaattatcatctgaaaaaacgaggaatcgaatcttccaaatctcataaaaccgtggaacgatctgaaggatcttccagtggtgaattctgttcacatgatattatcgaccgttgtcttccttgttcatcatgttgtgaatcaatcccctgtccttgttcttgttcttgtccatcaccttgtccgtatccttgttcttgtccttatccttgttccttaccttgttcacttccatgctcttgtccatgtctttgtccttcttctaatatccacaatattcatctgaaagaacgagaaaccgaatcttccaaatctcataaacccgtggaacgatccgaagggtcatccagtcaggtattttggtcacatgatataaccaaccgttgtcttccttgttcatcctgctgtgagccaatttcctatccttgtccttgttcttgtccgtgtccgtgtccgtgtccttgttcttgtccttgtccgtgtccttgttcttgttcaacaccttgtccatgtccatgctcttttccttgtctttgtcctgtttctgagtttcacaatgataatctgaaaaagagggaaatcgaatccgacaaatcattcaagcctgtgcaacgatctaaaaaatcttcaagtgaggaatttcggtcacatgataatttcgtccgttgtcttccttgttcatcttgttgtgatcccattacctatccttgtccttgttcttgtccttgtccgtgtccttgtccgtgtccttgtccgtgtccttgtccttgtccttgttcttgctcttgtccatcaccttgtccatgtccatgctgttgtccttgtctttgtcctgcttctaacttttgccaaaaaagggaaaacgtatttggcagatctcgtaagcccgtacaactatctgaaggatcttccagtcaagaattttggtcacatgatataactgaccgttgtcttccttgttcatcatgttgtgaaccaatctgtccttgttcttgtccttgtccgtgtccttgcccttgttcttgcccttgtccttgcccatcaccttgtccaggtccatgttcttgtccttgtatttctcctgcttctaatttccacaatgatcatctgaaaaagagggaaatcaaatctttcaaatctcatgaacctgtgcaacgatctgaaggatctttcagtcaagtatttcgttctcacgatataaccgaccgttgtcttccttgttcatgttgttgtgaacctattccatgtccttgtccgtgttcatgttcttgtccatctccttgtccatgcccttgtcaatgtccttgtccatgtccttgttcatgtcctaatccattaccttgtccatgtccttgtctttgttctcctgccaatttccagaataaccatctgacaaaaagagaaaacgaattttccagatctcataaacctgtggaacgatctgtaggatcttcttgtcaagaattttggtctcacgatataactgaccgttgtcttccttgttcatcttgttgtgaatcaatcccctgtccttgtacttgtccatgtccatgtacttggtcgtgtccttgtccatgtccttgtccattaccttgtccttgtccttgtctttgttcttcttccaatttccacaatgaccatctgacaaaaagggaaatcgaatattccaaatctcataaacctatggagctatctgtaggattttctagtcgagattttgggtcacccgatagttttgaccgttgtctttcttgtacttcttgttgtgaaccaatctcttgtccttgtccatgtccatgttctcatccttgtcttcgtgctgtttctaattttcacaatcatctaacgacgagtgaaatcgaatcttccaaattttataaaccagttgaaagatctgaagaatcttccaatcgaaagtattggtcacattctagagccaaccgttgtcttccttgttcaccttgttgtgacccaattccctgtccttgtccttgtccctatccttctacttgtccttgtccatgtccttcttcttgcccttgtgctggtccttgtccttcctataattctcgaagtaatcatctgtcaaaaagaagaatcgagtcctccaaatcacataaacccgtggaacaatctgtaggatattccagtgaagaatttttgtcacatgataatactgaccgttgccttccttgtcagtcctgttgtgaaccaattcccaatccttgtacttgtaattgtccttatccttgcccttgcccttgcccttccccttgtccttgtgattattctagtcgttgtcctttttccgattatcacagtgatcatcgaatgaatagagaaattgaatcttctaaagctcataagctcattaaacggtctgaagaatcttccagtcgagatattttgtcacatgatatcaccaaccgttgtctcccttgctcctcctgttgcgaacctatatcttgttcttgtccttgttcttgtccttgtccttgttcttgtccttgtccttgtccttgtccttgtccttgtccttgtccttgtccttgtccttgtccttgcccttgttcttatgcatttccatcttttgattatcacaacaatcatccggaaaaaagagaaatccaatcttccaaatcgcataaacccgtagaacgatctgttgattcttcaagtcgagactgttggtcacatgatataaccgagcgttgtcttccttgtccctcctgttgcgaacaaataccatgtcctggtccatgtccatgtccttgtccttgttcttcttcttgtccttgtccatgtccatgtccttgttcttgtccatgtccttgcccttgttcttgtccgtatccgtgttcctgtcctgctttcaatcatccgataaaaaggcactttgaatttcatgaaccgatggaactatatgaaggagcttctaatagagacaattggtcacatgataaaaccaaccgttgtgttccatgttcatcttgttgtgaacaaatcccttgtccttgtccctgttcttgtccttgttcgtgtccttgttcgtatccttgttctggtccttgcccttgcccttgtccctgcctttctccttcttcttgtcctttttccaattgtcaaattgatcatccttcaaaaagggaatttgaatctttttccccttgtgaacccctggaaggatatgtagcagcttcctgtcaagattatgggtcacatgatattactgaccgttgtattccttatcacagctgttccaaaccaatgctttgtccttgttcttatcattgttctagtccttgtgcttatccttattcttgttccttttttaatcttcacagtgatcatccgacaaaaaggcactttgaatcttctgactctcatcaaccattggaacgatctgtaggagtttccggtcaagaatatcagtcacatgatattacagaccgttgtcttccttgttgcgaaccattaccattacctagtacttgtacttgtccatgttcttttccttgtccgtgttcttgtccgtgtccttgtccttgtccgtgttcttgcatttctccttcctctgatacttatatttgcccttcttctaattaccacagagacttaaaacaatcttcaagtatctccagtgaacaaggtaacttgcatttcatcgaagatcgttgtcttcctaatccgtcgtgttgtgaacccatacctttacctagttcatgcccttgctcttgtccttgtggttatccatgttctagttcatgttctgattttcaaattgcgcatcgggttaaaagaaaattcgaatctggtgagtctcataaaattgtggaaccgtctcaaaaaccttctgctctaaaatattgtcttaatgatatgaagaagcgacataccatattgaattgtgaaccaacaactagtccatttgttagttcttgcttttgtccttgtcctagttcatgccctggtacatgcccatatccttgttcatatccttgtccatgcccttgttgcagtccttctgcgagaaaggctttagaaaccaataaattccataacgtcgaggaacgttctataagttcttctactaaaaatccttcagaagttgtgaaggaagatagatgtgcaaattcatgtgattgttgttcgtatccttgcaattcttgtagttgcgcttgttcatgctcatgtccttttccttgtgatcccttgatctgcccccctccttaccaattttcaccaccctgtggatgtttatctcctttcgacgtatgtctatctccagatgaattatgttcatattcatatccttgttctccttatcagtgttccaaatcatgttctttgctttgctcatgtctcgatgcgattaaaagagaaataaaaacaaaatttcatagaataaagaatcgctgtccattagtgtcatatgatcctatttcctatgcatgccctcattctgcttcttgtccctgtcctagctgttattcttgtcttccatcctgtgatttcatatgttgtgagagatgtcgtcatatttatttatatccctgttcagacttccattcacatatatgtccttgtgctgcatattatcattgttcttgtccatatacattttcatgcatctgttctgctcctgccttatcatcatgctccaattgttatataagaagtatatctgacactccagataaacttcgttatcatgaaatcagaaatcgttgttcttatccgccatgtgattcccaacacccctttcctttactatgtccatatactcatccatatccctcttctcaaccatgctcatgtcctcttctttctttcattatggataacaacagacaacaaaaggatcaggagattaatatcaattcccaaaataaacgaatgtttaatccatcagaattcaaagattttgaaagtggagatcataaaattgttaaacgctgttgccctgactgtactccttggtgctgttcacaatctgttgctctagaaccttgtttttttggaagagatgaccgttcttcctctcaagatcataaaactattatttccaagttagaaaaagttcattctagagcagtggaaccggagtcgaatcttcaagaagatgataaatttcatggaataacagaatgttcagaacctcgctcatgctctcctggatataaatttcgttcagataaccaatgcttttatcctgtatcgtgttcctctactactagatcatcaggtgataatcatgaagcagaacatcttataatgaaaaggagttctcattgtgaagatgaagacatggaaatgagtgatgtgatgaatggatataataaggagaaaaaattgctcaataatgaacccagaggagtacgagaggatcaaatttgtccaaagtatcatatacgttcctatcctcaacattatttctccattatgaaaccgtatcatcaatctttcactgctcctgtggagaaacgagatcaagaaacagaaatattcaagaatcagagatacagttacccagatctaatttcttattacacgtctatgtctccagaatgttttcatccaatgatccatacttatcacacaacttgtccaaatgactgctctgcatctcattctattttccgtataaattctcctcataatatcaaaaagcgtttatgtgttccatttacttatttatggattgagccattttgcccatttccatgtacttatcccgaaatacattgtacttgtccagatattgtctgtccatcatgcacttgtaattgtccagtctcatgtattccagtgaaaaatgtttgtaggcaatgccaaagttcccatcccaatatgtatgaacctcatttcatcacaaaacgtaaaacatccgaacattcaacagtattcccaaaaattgaagaatcaaaacttatcaaaatgtgcacttctgaatatcccttttcttttacaccaagtacttcgtgctcttgctattatccaatatcataccagtgttcattacctggtctttgtgggttatcttgcccgtgttataaaactaacgatataggtgaatattcagaagaaagcgaagataaaagatttggacgatgtcttccccaatgtgacttttgtgatccctatttttgcaatccatatcattttaattgcaatcaatattcctgttcctgtccatgctcctctatttgccttcctacttgtgcgtctccatgtccttgtccctccatctatccttacatcatctcttgttgcatgtcttgtaaaagacaaattcgaaatttgccttcgaatcccagattgaatgagcgttgcgtttttggatttctgcattttccatctccatgttcacaaaatctctgcaacccgttcaggacatgtaagatatgtgatccttgctctaattgtagatcatgtaaatgtggatcttgcggtaattgtccttgtgatttttataactgtgattggccttgtaagcgagaaagtcaaaaagaaagcaatcatagaatcgaagaacgaagtccatgttgttgttctcaggatccatgccggacaatatgtattcattcttatcctgaattgagtctaccaaattgttggggtacctgttgttgttctccgtaccgagactgttctccaacaagtattccaggatcatttccttgtcccgaagtttgctgtcagatacccgaattatgtccactaccctgctcaagtcattttccatactctccagttccttgtactataaattatggaattccatgtccttgcacatatttgagcaagagatgctgttcttcaccttcttcttatccagtttatatttctggacagttttctgatcgtatgaagcgcaataggctgtgtccaaaatttctcaatgatattcccaagtccaagcaattacgtgactgcctagattgttgcactcctccatattgcatcgaatctataagctttaatgatccgttctcttgtttcgaaccagtttgtcaattacctttttgtactcgaaattgtatctgcgggtgtaattgtgatgaatctgaatctaaccgaatcgaaccttattgtccagatccttgtgctgtatcaaaaccttgtttccaatgctgccaagaatctgactttccttgtcctccttggtattggaattgtaatattattggtccttgtagatataagtgtaatagtgagaacaccagagttccacttcagaggaggtcaaacattcttcaaccatcaattattctaccttcttcagcatcagcttccgatcttattgccagttcaaatttcaaaaccgatactgaaaataaagagaagcgtaaatgtccaaaaccctgtgaaccattaccaccttgtccagcttgtccacctgcttgtccattaccatgtgatgatactgccaatgacatgttagtacagaaagcacgacaagtgaacgatcgtctgaaaaatgaatatctaagcggccgttacataatcaataatcaagtcatccctagaaatcgaagacagttatcatcagtagaaaattcaattcaggcaagacaaccgcatcaggactcttcagacagacagaatgaagaactgaactatttggggaacaatatgaaggaaaattcacctgatgaattcaaagaaccagaaaatatcttcaagagttcgaatgacggttttgatgaagatgatgtgatttctcaaattggaaaaattcgtcgtcggaattgtcaaaaagattgtaatacagaaagttgctgtagaagtgaactcaatcctgaagatttcatgcttttgcgtaaaaagagcaacagcgagtatcaagacatgcattttgccaaagaaattgtagaagcaataatgaacaaagttaataaaaacacgaatctcaaaattaaaattggaaatgctctaaataagaagagaatatatgaaacagaaaataatcagagaaactacgccaaagtttgtagtttcgaagaacgcgcagaatacgaagaagcgaagaatttactcagatctgtatcctgcgttctgaataaattggttaagagacagattgaagaaaaactttgtgaaagacttccaagtcacctgaaaaatttcttgaaaagaatagtgagacctccaaagcatagaatcagttcacgacatgatgacaaataccatgaagatacttttctatttagagcatcctgtccccctgctagactagacccagatcttaggagccaacttgaagtcaaccttgtcaaattattggatcaatataatcaactcgatgaagattcccggaagagggcagcaccattgaagagttacatagcgaaccatctcaatatgctgaaaaaaattgatgatgaaacatatcatacggaaaacgcagctgctaattctgagaactatatggaaacaaatgatatgcctcaaattcgcacgagaagtaattctgatgatctgggtttggataattcagtgaataccagaatttctgccaataatctagatacaatcgaaaaagatcttgaaaatatcgatctttacaaaaaaagaaactcgtttcagaatcccctattcaacttaaataattttccacctctcaaaattgaagaaaataattttattaggcctaaactacggaagaggaatattaataatctcgtagacaaatttaaaatatctacagaaaagaaaacagatgatgatttgtcatcggataattataagaaattagttaaagcatcagaagaaatacgatttaagagaaagaatgatgaaaaaattggagaaacatttggaaataagaaaagtgttgaaaataatctgaatgccaaagaagatgaagatgaggtggcattcgaaacacctcttatttatagaacgtagttcattctgttattttataattcatcaaccaatctgattgggagcaatttgttcttcataatcatacattatattttttattttatattattataaagtgtgtaataccgtt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]