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2024-05-17 02:02:56, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_045122971             768 bp    mRNA    linear   PLN 12-NOV-2021
DEFINITION  PREDICTED: Hordeum vulgare subsp. vulgare protein FLORAL ORGAN
            NUMBER2 (LOC123446299), mRNA.
ACCESSION   XM_045122971
VERSION     XM_045122971.1
DBLINK      BioProject: PRJNA774802
KEYWORDS    RefSeq.
SOURCE      Hordeum vulgare subsp. vulgare (domesticated barley)
  ORGANISM  Hordeum vulgare subsp. vulgare
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP
            clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_058521.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Hordeum vulgare subsp. vulgare
                                           Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..768
                     /organism="Hordeum vulgare subsp. vulgare"
                     /mol_type="mRNA"
                     /sub_species="vulgare"
                     /db_xref="taxon:112509"
                     /chromosome="4H"
     gene            1..768
                     /gene="LOC123446299"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 59 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:123446299"
     CDS             73..444
                     /gene="LOC123446299"
                     /codon_start=1
                     /product="protein FLORAL ORGAN NUMBER2"
                     /protein_id="XP_044978906.1"
                     /db_xref="GeneID:123446299"
                     /translation="
MRNSSLMVRLKVALPSMATVRFLLCLLVAWCCAALVILVPPAHARVGLVGGFGGRDNPAAAGFLHVGSESKQQQQPRGGGGSRYAWWSPPAWNEELRSVPAGPDPLHHHGSPRRPEQEPEHLP"
     polyA_site      768
                     /gene="LOC123446299"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
tctcctaccagtacagtatatagtgcaagatggttttatctataagaagccctgtatgtccctttgggagacatgcgcaactcaagtttgatggtgcgactgaaggttgctttgccatccatggccacggtccggttcttgctgtgcttgctggttgcatggtgttgcgcggctctcgtcatccttgtccctccagcgcacgcacgtgttgggctggtgggtgggttcggcggtcgcgataacccggctgccgcgggatttctccatgtgggatcggagtccaagcagcagcagcagccgcgcggcggcggcggcagcaggtatgcgtggtggtcgccaccggcatggaacgaggagctgcggtcggtaccggctgggccggacccgctgcaccaccacggcagcccgaggcggccggagcaggagccagagcacctcccgtgaggacaaataagcaatccgcgggcacgccattggcccctttctgggatgtgatgtacaaacacgcgtgtttcatgctttgccgtgatgtaccaacaatgcgttcgtttggtgttttgaacaagagtagtccatgccctccctccgattttcattactagctataccagtctcgttgtttcactgtacgttagcatttgtgatcgatgcggtgcgtcatcgactcgtcggcccgtggaactggatatatccgtgccctcatagtgaagtccttagagcaactctagcagacagtttatatcaaacacctgtatggtcttttacgta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]