2024-05-20 05:00:19, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_043871798 800 bp mRNA linear MAM 27-SEP-2021 DEFINITION PREDICTED: Cervus elaphus leucine zipper protein 6 (LUZP6), mRNA. ACCESSION XM_043871798 VERSION XM_043871798.1 DBLINK BioProject: PRJNA764704 KEYWORDS RefSeq; includes ab initio. SOURCE Cervus elaphus (red deer) ORGANISM Cervus elaphus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_057832.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Cervus elaphus Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 9.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 27% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..800 /organism="Cervus elaphus" /mol_type="mRNA" /db_xref="taxon:9860" /chromosome="18" gene 1..800 /gene="LUZP6" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 23 ESTs, 1 Protein, and 83% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:122673881" CDS 1..432 /gene="LUZP6" /codon_start=1 /product="leucine zipper protein 6" /protein_id="XP_043727733.1" /db_xref="GeneID:122673881" /translation="
MRARLRRGGAHSSAAGRLDFGFPLPLHMDFMLIRVGLEFCIKSVFSDALFQVKTGGLPVYISILTDSPLQLPTGVLRLTVQLRHRNRPSSSLHSSPSKPSGARRRSRWMPWVEAVSKQALHSLISFPQIMDFKSICTYLIFFP"
polyA_site 800 /gene="LUZP6" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN
atgagagctcggttaaggcgagggggcgcacactcctccgctgctggacggctggactttgggtttcctctcccccttcacatggatttcatgcttattcgagttggattagaattttgtattaagtcagtcttttcagatgcactatttcaagtgaaaacaggtggtttacctgtctacattagtatcctaacagattcccccttgcagcttccgactggtgtcttgagacttacagttcagctccggcaccggaatcgacccagtagttctctgcacagctcaccttctaaacccagtggggcacgaaggagaagtaggtggatgccatgggtggaagctgtcagcaagcaggcccttcattcattgatttccttcccccaaataatggatttcaaatctatatgtacttatttgatttttttcccctaaaacttcaactaagctgctgttttcttccatgcaatattgtgtactcgattgtgtatagaagaagctggtgagagtgccctcctacataagcaattgcagtgtttgcatgcaaaattttaaaaaatttaaattgtcctgattctattttgtaaatggagaaacaatcatatctttctaagcagtaatggaggaagactagtgctttgtgcattttgatatatttgagttcattttttccacaatgtaatacatttgacacagttgggtttctcatattatcctagttcatgtacatcagaatgctaaataatactgtgtttaagttttgtgttgcaagaacaaatggaataaacttgaattgtgctaca
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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