LOCUS       XM_043243539            1029 bp    mRNA    linear   VRT 24-AUG-2021
DEFINITION  PREDICTED: Puntigrus tetrazona transcription elongation factor A
            N-terminal and central domain-containing protein (LOC122348246),
            transcript variant X2, mRNA.
ACCESSION   XM_043243539
VERSION     XM_043243539.1
DBLINK      BioProject: PRJNA753523
KEYWORDS    RefSeq.
SOURCE      Puntigrus tetrazona (Sumatra barb)
  ORGANISM  Puntigrus tetrazona
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Ostariophysi;
            Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_056705.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Puntigrus tetrazona Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1029
                     /organism="Puntigrus tetrazona"
                     /mol_type="mRNA"
                     /isolate="hp1"
                     /db_xref="taxon:1606681"
                     /chromosome="7"
                     /tissue_type="muscle"
                     /dev_stage="mature"
     gene            1..1029
                     /gene="LOC122348246"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 7 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 10 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:122348246"
     CDS             61..981
                     /gene="LOC122348246"
                     /codon_start=1
                     /product="transcription elongation factor A N-terminal and
                     central domain-containing protein isoform X2"
                     /protein_id="XP_043099474.1"
                     /db_xref="GeneID:122348246"
                     /translation="

MLYVLARKEDIEGNNKDVWEDKGPETHDLPNVEVSHLNEKGIENQAFACNTEQHDTTVKDVNQDRCDACLNKLSLEKHCPAKDAAERVQLPAPAAASHSTSHSEKDSQTSVPQNASQPSASSDSITVRSKCVCLIAQALTLNHQIDSDVMKKRKALAEDIETRVHDLHGRNQLKYKSCIRSKVANLKNPKNPHLRQGLISGHLTPDAFARMSVEEMAGEELRQLREGYTTMGISEHQLPEAVEGTATNKVRCRRCGGLDCKVTQVSRGTLFLPSWVRSGSADDDSMTFMTCASCGEQWYHSSWVCL"

     misc_feature    <298..954
                     /gene="LOC122348246"
                     /note="transcription elongation factor S-II; Region:
                     TFSII; TIGR01385"
                     /db_xref="CDD:273592"
     misc_feature    439..738
                     /gene="LOC122348246"
                     /note="Transcription factor S-II (TFIIS), central domain;
                     Region: TFIIS_M; pfam07500"
                     /db_xref="CDD:429495"
     polyA_site      1029
                     /gene="LOC122348246"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      

tgtaaaaaaaatggcggaaggattgcgagttgtctcttttgaaaaaggttgtactgttgaatgttgtatgttttagcaaggaaagaagacatcgaaggtaataacaaagacgtgtgggaggacaagggaccagaaacacacgacctgcctaatgttgaggtgtcccacttaaatgaaaaggggattgagaatcaagcatttgcatgcaacacggagcaacatgatacaacagtaaaggatgtaaaccaggacagatgtgatgcatgcttaaataaactgtctcttgaaaagcattgtccagcgaaagatgctgcagaacgtgttcagctaccagctccagctgcagcgtcacatagtacatctcattcagagaaagattctcaaacttcagttcctcaaaacgccagtcagcccagcgcctcctctgactccattacagtgagatccaaatgtgtctgtttgatcgcccaggctcttactttaaatcatcaaatagactcagatgttatgaagaaacgcaaagccctcgccgaggacattgaaacacgcgttcatgatcttcacggacgaaaccagctcaagtacaagtcctgcatcaggagcaaggtagccaacctaaaaaacccgaagaacccccacctgcgccaaggccttatatcaggacacctgactccagatgcatttgcccggatgtcagtggaggaaatggcaggggaggaacttcgacagctcagggaaggttacaccactatgggcatcagtgagcatcagttgccagaggcagtggaagggacagccaccaataaagttcgctgcaggcgctgcgggggtttggactgtaaggtgacacaggtctcacgagggacactcttcttgccatcttgggtacggagtggcagtgcagatgatgattcaatgactttcatgacgtgtgcaagctgtggagagcaatggtaccacagcagctgggtttgcctttgagcaagtgtgtatatttataattgtaataaagatggatagtaatatttt

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