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2024-05-19 03:30:03, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_042483197             448 bp    mRNA    linear   VRT 19-JUL-2021
DEFINITION  PREDICTED: Plectropomus leopardus potassium-transporting ATPase
            alpha chain 1-like (LOC121940419), partial mRNA.
ACCESSION   XM_042483197
VERSION     XM_042483197.1
DBLINK      BioProject: PRJNA744194
KEYWORDS    RefSeq.
SOURCE      Plectropomus leopardus (leopard coralgrouper)
  ORGANISM  Plectropomus leopardus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae;
            Epinephelinae; Epinephelini; Plectropomus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024695405.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Plectropomus leopardus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..448
                     /organism="Plectropomus leopardus"
                     /mol_type="mRNA"
                     /isolate="mb"
                     /db_xref="taxon:160734"
                     /chromosome="Unknown"
                     /tissue_type="muscle"
     gene            <1..>448
                     /gene="LOC121940419"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 8 Proteins, and 99% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 3 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:121940419"
     CDS             <1..>448
                     /gene="LOC121940419"
                     /codon_start=1
                     /product="potassium-transporting ATPase alpha chain
                     1-like"
                     /protein_id="XP_042339131.1"
                     /db_xref="GeneID:121940419"
                     /translation="
GSIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNAADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVSVPLPLGCITILFIELATDIFPSVSLAYEKAESDIMHLKPRNPRRDRLVNEALAVYSYFQI"
     misc_feature    <1..447
                     /gene="LOC121940419"
                     /note="Haloacid Dehalogenase-like Hydrolases; Region:
                     HAD_like; cl21460"
                     /db_xref="CDD:451251"
ORIGIN      
ggctctatcgttgctgtgacaggtgatggtgtgaacgactctccggctctcaagaaggctgatatcggtgtcgccatggggatcgccgggtcagatgctgccaagaacgccgcagacatgatcctgttggacgacaactttgcttctatcgtcaccggagtggagcagggccgtcttatctttgacaacctgaagaagtctatcgcctacacactgaccaagaacatccctgagctgactccatatctgatctacatcaccgtcagcgtgcctcttcctctgggctgcatcacgattctcttcatcgaactggccactgacatttttccctccgtctctctggcttatgagaaagcagagagtgacatcatgcacctgaagcccaggaaccctcgacgtgatcgccttgtaaacgaagccctggctgtgtactcgtacttccagatcg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]