LOCUS       XM_042481853            1336 bp    mRNA    linear   VRT 19-JUL-2021
DEFINITION  PREDICTED: Plectropomus leopardus homeobox protein Hox-B8-like
            (LOC121938676), mRNA.
ACCESSION   XM_042481853
VERSION     XM_042481853.1
DBLINK      BioProject: PRJNA744194
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Plectropomus leopardus (leopard coralgrouper)
  ORGANISM  Plectropomus leopardus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Actinopterygii; Neopterygii; Teleostei; Neoteleostei;
            Acanthomorphata; Eupercaria; Perciformes; Serranoidei; Serranidae;
            Epinephelinae; Epinephelini; Plectropomus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_024633717.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Plectropomus leopardus Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 9.0
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 14% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1336
                     /organism="Plectropomus leopardus"
                     /mol_type="mRNA"
                     /isolate="mb"
                     /db_xref="taxon:160734"
                     /chromosome="Unknown"
                     /tissue_type="muscle"
     gene            1..1336
                     /gene="LOC121938676"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 30 Proteins, and 94% coverage of
                     the annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:121938676"
     CDS             1..489
                     /gene="LOC121938676"
                     /codon_start=1
                     /product="homeobox protein Hox-B8-like"
                     /protein_id="XP_042337787.1"
                     /db_xref="GeneID:121938676"
                     /translation="

MLESSLASNNASLPCLPLSSPPPPPVAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKKENNKDKFPSSKSEQEAVERERREKELRDGSGSGGGEGGGGGAEGGGGGGSVAVAGTAGPQGSVSEDCCEKTHKQM"

     misc_feature    order(91..105,109..111,160..162,178..180,217..219,
                     223..228,235..240,244..252,256..261)
                     /gene="LOC121938676"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(97..99,106..108,226..228,235..240,247..249)
                     /gene="LOC121938676"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    100..258
                     /gene="LOC121938676"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

atgttggagtctagtttggcttcgaataatgcctctctcccgtgtctccccctctcctcaccccctcctcccccagtagctgcgggcaggaggcggggtcggcagacctacagccgctaccagaccctagagctggagaaggagttcctcttcaacccctatctgacccggaaacgccgcatcgaggtgtcgcacgcgctggctctgacggagcggcaggtaaagatctggttccagaaccggaggatgaagtggaagaaggagaacaacaaggacaagttcccgagcagcaagagcgagcaggaggcggtggagagggagcgcagggagaaggagctgcgggatggtagcgggagcggaggcggagagggtggcggcggaggtgctgaagggggaggaggaggcggctcagtggcggtggcgggcacggcggggccccagggctccgtaagtgaggattgctgcgagaaaacccacaagcaaatgtaaggaggaaagcggagaagttataaagggaaggtaggcggaggagggagtgagagatggacaggagggggtgagggtgggtgcgggtgggcgaggggctgtttttgtcttaattgaagccattggactgctccgttgtctccacaattcaattgatggaaaggaacttgagtctccaaaaaaatggccactggcgagccggacggactggaggggcctcgcgcctctgtctcctgactgtacaaaccgcgggaaagaaaaaaaagaagaaaaaaagaaacattgaagcaagaactaaaaaaaaaaacacaactgatgagggcggggtttatccatccaagtcaaacaaacatagtctactctagtgtttaaaacaaacaaaaaaaaaaagaaagaaaaatgatagcttcctttctttgtggaacaattatcgtggaaacatttctatattgttagaagtttatcattaacaattttatctttggcagctgtatagtttttaagttaaaaaaatgatgatggtgcactttttactgtacttctcacttctatgttgttgatgttgttatggcaatgattgattgattgattgattgattgatgataatgatgatgatgatgatgatgatgatgaagatgatgatgataatgatgatgacgtagcaattaatgaaatttccaacaacatgaaactgcctatttatgccgttttagtaggtcgggtctcttttttacacactctaattgtcgtttctcgttttagtttgttttttgatcgatggtgtttgttttatgttgtcttcctttttctcttttttgggtaaaaagcatgcgcacagtgcagattaaa

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