LOCUS       XM_036341825            1478 bp    mRNA    linear   MAM 30-SEP-2020
DEFINITION  PREDICTED: Myotis myotis homeobox B8 (HOXB8), transcript variant
            X1, mRNA.
ACCESSION   XM_036341825
VERSION     XM_036341825.1
DBLINK      BioProject: PRJNA665501
KEYWORDS    RefSeq.
SOURCE      Myotis myotis
  ORGANISM  Myotis myotis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Chiroptera; Microchiroptera;
            Vespertilionidae; Myotis.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_023416321.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Myotis myotis Annotation Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.5
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1478
                     /organism="Myotis myotis"
                     /mol_type="mRNA"
                     /isolate="mMyoMyo1"
                     /db_xref="taxon:51298"
                     /chromosome="Unknown"
                     /sex="female"
                     /tissue_type="flight muscle"
                     /dev_stage="adult"
                     /country="France: Limerzel"
                     /lat_lon="47.6333 N 2.3500 W"
                     /collection_date="2015"
                     /collected_by="Emma Teeling, Sebastien Puechmaille"
     gene            1..1478
                     /gene="HOXB8"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 17 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 8 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:118672255"
     CDS             42..773
                     /gene="HOXB8"
                     /codon_start=1
                     /product="homeobox protein Hox-B8 isoform X1"
                     /protein_id="XP_036197718.1"
                     /db_xref="GeneID:118672255"
                     /translation="

MSSYFVNSLFSKYKTGESLRPNYYDCGFAQDLGGRPTVVYGPSGGGSFQHPSQIQEFYHGPSSLSTAPYQQNPCAVACHGDPGNFYGYDPLQRQSLFGAQDPDLVQYADCKLAAASGLGEEAEGSEQSPSPTQLFPWMRPQAAAGRRRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKENNKDKFPSSKCEQEELEKQKLERAPEAAEEGDAQKADKK"

     misc_feature    order(480..494,498..500,549..551,567..569,606..608,
                     612..617,624..629,633..641,645..650)
                     /gene="HOXB8"
                     /note="DNA binding site [nucleotide binding]"
                     /db_xref="CDD:238039"
     misc_feature    order(486..488,495..497,615..617,624..629,636..638)
                     /gene="HOXB8"
                     /note="specific DNA base contacts [nucleotide binding];
                     other site"
                     /db_xref="CDD:238039"
     misc_feature    489..647
                     /gene="HOXB8"
                     /note="Homeobox domain; Region: Homeobox; pfam00046"
                     /db_xref="CDD:425441"
ORIGIN      

ctacagccgccgccgccgccgccgcctcaaaattcaataaaatgagctcttatttcgtcaactcactgttctccaaatacaaaacgggggagtccctgcgccccaattactatgactgcggcttcgcccaggacctgggcggccggcccaccgtggtgtacggccccagcggcggcggcagcttccagcacccgtcgcagatccaggagttctaccacgggccgtcgtcgctgtccaccgcgccctaccagcagaacccgtgcgccgtggcgtgccacggggaccccggcaacttctacggctacgacccgctgcagcgccagagcctgttcggcgcgcaggaccccgacctggtgcagtacgcggactgcaagctcgcggccgccagcggcctgggcgaggaggccgagggctcggagcagagcccgtcgcccacccagctcttcccctggatgcgcccgcaagcagccgccggacgcaggcgaggccgacagacctacagccgctaccagaccctggagctggagaaggagttcctatttaatccctatctgactcgcaagcggcggatcgaggtgtcgcacgcgctgggactgacagagagacaggtcaaaatctggttccagaaccggaggatgaagtggaaaaaggaaaacaacaaagacaagttccccagcagcaaatgtgagcaggaggagctggagaagcagaagctggagcgggccccggaggcggcggaggagggcgacgcgcagaaggccgacaagaagtagcctccagctgggactgccagggccgcggccgccctccgcccgcccgcccgccgccgccgccgcccgtccgcccgcccgcccgcccgagagctccggccccgcgagcggcgccccgagcctggcctcccgccgcagcgtccccaccgcgccagtccccgctagtggtagtatctcgtaatagcttctgtgtgtgagctaccgtggatgcccttcccttccatgggggccggggaagacagggatgtgagcaaggactccctcgcccagcgagggggagcggttgctgctcggccgagccccctccccacgcccccgtcccgtgtaaaaagcctccttgtgcaatggccccctttccctgtaatgaccgaggtaccgatttctgctaagttctcccaacaacatgaaactgcctattcacgccgtaattctttctgtctcccctccctctctctctttctctctttctctctctctctttgaccccccccttcctcatttcctcctcccaccccctctgtccccgctgccctacctagctcgctggctttctctcttgcttctctttcctcccgcccccttctttgatttgacaatttcgtcttaagtgtttctcaaaagaggttactttagttagcatgcgcgctgtgggcaattgttaaaagtgttcttaggtttactgtgaagagaatgtatcctgtatccgtg

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