LOCUS       XM_036157668            1617 bp    mRNA    linear   ROD 10-APR-2023
DEFINITION  PREDICTED: Mus musculus trafficking protein particle complex 6B
            (Trappc6b), transcript variant X1, mRNA.
ACCESSION   XM_036157668
VERSION     XM_036157668.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000078.7) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2023_04
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 04/05/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1617
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="12"
     gene            1..1617
                     /gene="Trappc6b"
                     /gene_synonym="5830498C14Rik"
                     /note="trafficking protein particle complex 6B; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 13 ESTs, 2210 long SRA reads, 4 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 12 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:78232"
                     /db_xref="MGI:MGI:1925482"
     CDS             737..1099
                     /gene="Trappc6b"
                     /gene_synonym="5830498C14Rik"
                     /codon_start=1
                     /product="trafficking protein particle complex subunit 6B
                     isoform X1"
                     /protein_id="XP_036013561.1"
                     /db_xref="GeneID:78232"
                     /db_xref="MGI:MGI:1925482"
                     /translation="

MGFRVGQGLIERFTKDTARFKDELDIMKFICKDFWTTVFKKQIDNLRTNHQGIYVLQDNKFRLLIQLSAGKQYLEHASKYLAFTCGLIRGGLSNLGIKSIVTAEVSSMPACKFQVMIQKL"

     misc_feature    <737..1090
                     /gene="Trappc6b"
                     /gene_synonym="5830498C14Rik"
                     /note="Trs33 subunit of the TRAPP complex; Region:
                     TRAPPC6A_Trs33; cd14944"
                     /db_xref="CDD:271347"
ORIGIN      

cgcaccctggggtcctgcggtgacacttgcctccattcctctcccgccctgctgacgtagacgcccggtagcttagaccgagctggtccacctagaggcatcccacagaatataatctgtctgtcggctgcctcctccgagatgggatctctcatccatctccttttttgtcttctgtgtggtgtgttcgtgcccgtatgttcctttgagtgcgtgctacaggactttattcttgaccttgataagatttacctagagtctaactgcagagctgattgtgactttcctgcttaattttccaacagttttagaggccagctagccactgtcccagcgagactatacctttctcatctcttgattcaggataccactgcacacaactccaaggccacagcctgatgaaccgtggagttaaagcaaggaaactttgcgagattttcagcacattccatggccggacccagaggtgctgacggtgatggtgcagctcatcaccctcatcttcagagatctccaaggagacctgagactcaggctcggctgtatgagcaagtatgcagatagagcagacagcatgctgttattgcctttgatgaatacatggaactccatcagatgatgcggaaaacattctcagagtgaaaaacacagcaaggtctcatcatactcaaaatatccatctgctacaaagtgtttccaggaaaatggaaggtgtgttactaagctggagagcatggggttccgagtggggcaaggactgatagaaaggtttacgaaagatactgcaaggttcaaggatgaattagacatcatgaagttcatctgtaaagatttttggactacagtattcaagaaacagattgacaatctgaggacaaatcatcagggcatatatgtacttcaggacaacaaatttcgactactcattcagctgtctgcaggaaaacagtatttagaacatgcgtccaagtatctagcattcacatgtggcttaatcagaggtggtttgtcgaacttgggaataaaaagtattgtaacagctgaagtctcttcaatgcctgcctgcaaatttcaggtgatgatacagaagctgtagagcgagctggcgactcctgggcagagcgttgcacatcctgatttcacctcatcgttggttatctgcgttggagcaaatcgttatctcaccagagtcacatagaccaaatcaaagtagacacaggtcctttgaccatgacagaaactgactgacctattcagtgatttcagagaactagacaccaagatgcaaggctcttcattttaaacatctttatttccataggtgattagcatttaaccatcaataggaagtgaaactcagggtgtgttgaattgctgtattaaaaaaaatgcaccaatcagaatagtttgtgttcaaatgaccaaaatttgttgaactataaatctgttttagttatttaaaaaagcaaaccactatgttaaattaagcttaatttttattgtattgcttataatttatttctgtcgagagaattcatatgcttatgtaaggatatcatttatacattgtgtatatatgtgtatatataaatacatgcattactgtctaaatta

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