2024-05-17 04:58:18, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_031545882 751 bp mRNA linear PLN 06-NOV-2019 DEFINITION PREDICTED: Punica granatum protein CLAVATA 3 (LOC116211479), mRNA. ACCESSION XM_031545882 VERSION XM_031545882.1 DBLINK BioProject: PRJNA580467 KEYWORDS RefSeq. SOURCE Punica granatum (pomegranate) ORGANISM Punica granatum Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_045132.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Punica granatum Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..751 /organism="Punica granatum" /mol_type="mRNA" /isolate="Tunisia-2019" /db_xref="taxon:22663" /chromosome="6" /tissue_type="leaf" /dev_stage="mature fruiting plant" /country="China: Zhengzhou" gene 1..751 /gene="LOC116211479" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns" /db_xref="GeneID:116211479" CDS 189..482 /gene="LOC116211479" /codon_start=1 /product="protein CLAVATA 3" /protein_id="XP_031401742.1" /db_xref="GeneID:116211479" /translation="
MASSAALMAVCLLLLGASTLSAPLTTVSIRKVLVAVEDPPLVSNAIGAVPGGIEKSEGGGEMVESELRRVPSGPDPLHHHGSAPKKPDNRKSLPQTP"
ORIGIN
ttcaaaaaatggctgctggaacaatcatttgggacagagcatcctcatctcttgtgcagatgatgatccgctcctgcttccatggcttccctataaatgccttgcctccagctctccctcttcttcacacctctcacctgtaccgtctctgttgataaggtgaagtcttcccataggaggttcataagatggcttcgtctgcagctttaatggccgtgtgcttgctgctcctgggagcctccactctgtcagctccgttgacgacagtgagcatcagaaaggtcttagtggctgtggaggatcctccattggtatcgaatgccattggagctgtcccgggagggattgagaagagcgaaggtggaggggagatggtagagtcagagctaagaagggttccttcaggtcctgatccgctgcaccatcacggttcggctcctaagaaacccgataaccgaaagagtctaccccagactccataagtgtccgtcccgagtcgttttttaacagttaggggaatgaaaactaaccttccttttggttctccccgaaaatgacgttagtcagtctcaccagctgaagtcagtcttgacgtttttgagttgcttctttttgggggtttgtcatatatatgtttgtctgctccctatatgtcagtcgtctatggctaatagcctaagagaagaattggaaccacataatatagtgcatggtaacaatacaatgtacaaaacgggcgcaatgcattttg
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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