2024-05-20 05:34:45, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_031430850 659 bp mRNA linear PLN 22-OCT-2019 DEFINITION PREDICTED: Pistacia vera LOB domain-containing protein 1-like (LOC116145384), mRNA. ACCESSION XM_031430850 VERSION XM_031430850.1 DBLINK BioProject: PRJNA578116 KEYWORDS RefSeq. SOURCE Pistacia vera ORGANISM Pistacia vera Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Anacardiaceae; Pistacia. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_022196292.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Pistacia vera Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..659 /organism="Pistacia vera" /mol_type="mRNA" /cultivar="Batoury" /db_xref="taxon:55513" /chromosome="Unknown" /tissue_type="leaf" /country="China" gene 1..659 /gene="LOC116145384" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 8 samples with support for all annotated introns" /db_xref="GeneID:116145384" CDS 122..640 /gene="LOC116145384" /codon_start=1 /product="LOB domain-containing protein 1-like" /protein_id="XP_031286710.1" /db_xref="GeneID:116145384" /translation="
MGSEKVSRTRTHQPCAACKMLRRRCDNNCILAPYFPIDEIENFACVHRVFGASNVIKMIQMAEETKREDAVKAIVYEATARLRDPVYGSAGTTFHLHKMVQDLKFELESIQSRVMALQEQRNQLLGIVMNVHHQDPVYPINDSMFDCGDFSLDDGSLAYDPVNFSMECDWIL"
misc_feature 161..457 /gene="LOC116145384" /note="Lateral organ boundaries (LOB) domain; Region: LOB; pfam03195" /db_xref="CDD:427193" ORIGIN
ttttgaatttaagtcccccataaacaagctatatacttacctgtttcttggcaacttcgcttttctttctgttatatatacttggattatttattccccaaaccaccatagtccttaaaaaatgggttctgaaaaggtgtcaagaaccaggactcatcaaccttgtgctgcttgtaagatgctacgtcggagatgtgacaacaattgcatacttgcaccatattttccaatcgatgagatagaaaactttgcctgtgtgcatagagtttttggagctagcaatgtcattaaaatgattcagatggctgaggagacgaagagggaggatgctgtcaaagcaatagtttatgaagcaacagcaaggctcagagaccctgtttatggcagtgctgggactacttttcacttgcataagatggttcaggatctgaaatttgagttggaatcaatacaaagtcgagttatggcgttgcaagaacaaagaaatcagttattgggtattgtcatgaatgttcatcaccaggatcctgtctaccccataaatgactccatgtttgattgtggggatttctcattagatgatggatctctagcctatgatcctgttaacttttctatggagtgtgactggattttgtaaggagattctgattctcccc
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@meso_cacase at
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This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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