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2024-05-19 05:47:54, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_029931343             301 bp    mRNA    linear   MAM 14-JUL-2019
DEFINITION  PREDICTED: Suricata suricatta sodium/potassium-transporting ATPase
            subunit alpha-2-like (LOC115284886), partial mRNA.
ACCESSION   XM_029931343
VERSION     XM_029931343.1
DBLINK      BioProject: PRJNA553468
KEYWORDS    RefSeq.
SOURCE      Suricata suricatta (meerkat)
  ORGANISM  Suricata suricatta
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia;
            Herpestidae; Suricata.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_021870295.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Suricata suricatta Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..301
                     /organism="Suricata suricatta"
                     /mol_type="mRNA"
                     /isolate="VVHF042"
                     /db_xref="taxon:37032"
                     /chromosome="Unknown"
                     /country="South Africa: Kalahari Meerkat Project"
                     /lat_lon="26.98 S 21.83 E"
                     /collection_date="02-Feb-2016"
     gene            <1..>301
                     /gene="LOC115284886"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins, and 100% coverage of
                     the annotated genomic feature by RNAseq alignments,
                     including 12 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:115284886"
     CDS             <1..>301
                     /gene="LOC115284886"
                     /codon_start=1
                     /product="sodium/potassium-transporting ATPase subunit
                     alpha-2-like"
                     /protein_id="XP_029787203.1"
                     /db_xref="GeneID:115284886"
                     /translation="
DLKDMTSEQLDEILRNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGIAMGITGSDVSKQAADMILLDDNFASIVTGVEEGEGP"
     misc_feature    <1..>291
                     /gene="LOC115284886"
                     /note="sodium or proton efflux -- potassium uptake
                     antiporter, P-type ATPase, alpha subunit; Region:
                     ATPase-IIC_X-K; TIGR01106"
                     /db_xref="CDD:273445"
ORIGIN      
gacctgaaggacatgacgtcggagcagctggacgagatcctccggaaccacacggagatcgtgttcgcgcggacgtccccgcagcagaaactcatcatcgtggagggctgtcagcggcagggggccatcgtggcggtgaccggggacggcgtgaacgactcccccgcgctgaagaaggccgacatcggcatcgccatgggcatcacgggctccgacgtgtcgaagcaggccgctgacatgatcctgctggatgacaacttcgcgtccatcgtcacgggcgtggaggagggtgaggggccgg
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]