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2024-05-19 15:13:55, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_029084676            1433 bp    mRNA    linear   VRT 02-MAY-2019
DEFINITION  PREDICTED: Antrostomus carolinensis ST6 N-acetylgalactosaminide
            alpha-2,6-sialyltransferase 5 (ST6GALNAC5), mRNA.
ACCESSION   XM_029084676
VERSION     XM_029084676.1
DBLINK      BioProject: PRJNA265383
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Antrostomus carolinensis (chuck-will's-widow)
  ORGANISM  Antrostomus carolinensis
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Neognathae; Caprimulgimorphae;
            Caprimulgiformes; Caprimulgidae; Antrostomus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_010311361.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Antrostomus carolinensis Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 3% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1433
                     /organism="Antrostomus carolinensis"
                     /mol_type="mRNA"
                     /isolate="BGI_N321"
                     /db_xref="taxon:279965"
                     /chromosome="Unknown"
                     /sex="male"
                     /country="USA"
     gene            1..1433
                     /gene="ST6GALNAC5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 2 ESTs, 17 Proteins"
                     /db_xref="GeneID:104523968"
     CDS             1..789
                     /gene="ST6GALNAC5"
                     /codon_start=1
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 5"
                     /protein_id="XP_028940509.1"
                     /db_xref="GeneID:104523968"
                     /translation="
MFTVNVEVCMSLQPLKMHCKSCALVTSSGHLLGSKQGDRIDETECVIRMNDAPTRGYGKDVGNKTSLRVIAHSSIQRILRNRNELLNMSHGAVFIFWGPSSYMRRDGKGLVYNNLQLMNQILPQLKAYMISRHKMLQFDDLFKRETGKDRKISNTWLSTGWFTMTIALELCDRINVYGMVPPDFCRDPNHLSVPYHYYEPLGPDECTMYISHERGRKGSHHRFITEKRVFENWARTFNIHFFQPDWKPEPLTVNHPEIKPVV"
     misc_feature    31..597
                     /gene="ST6GALNAC5"
                     /note="Glycosyltransferase family 29 (sialyltransferase);
                     Region: Glyco_transf_29; pfam00777"
                     /db_xref="CDD:425864"
ORIGIN      
atgtttacagttaatgttgaagtatgtatgtctttgcagcctttaaaaatgcactgcaagagttgtgcattggtaaccagctctggacaccttctgggaagtaagcaaggtgacagaatcgacgagacagagtgcgtaatacgaatgaatgatgcacctactcgaggttatggaaaagatgttggaaacaaaacgagccttcgagtcattgcacattccagtattcagaggattttgagaaatcgcaatgaactcttaaatatgagccatggtgctgtgtttatcttctggggtcccagcagctacatgaggagggatggcaaaggcttggtgtataataacctgcagctgatgaatcagatactgcctcaattaaaagcatatatgatttctcgccacaagatgcttcaatttgatgacctttttaaacgggaaactgggaaagacaggaagatatccaacacttggcttagcacgggctggttcacaatgactatcgcattagagctctgtgacaggataaatgtttatggcatggtgccaccggatttctgcagggatcctaatcatctttcagtaccttatcattattatgaacctttgggacctgatgaatgcacaatgtacatttcacatgagcggggacgaaagggcagtcatcatcgtttcatcacagagaaacgagtgtttgagaactgggcacggacattcaatattcacttttttcaaccagactggaaaccagaaccactcactgtaaatcaccctgagattaaaccagtggtctgagggatgaatgcataaaactgccatcacagtcacccactgtgtcaagccttcgaggtgttggaccttctgggatcgcaaggcaaccaagaggcaaagggtaacaggatctgcagctgataactgcaacaacagtctggaagttacgatgaaggagcagagtgtatcaagagtactttctgtggaaatgtgtatgaacccagtatatagcctttttggccatctgacttcctgtatgtgtatgtgatttgtgaaaaacaacttatcattaatgggatgggtaattcattatgggtttttaaagtacaatgccactgaattttcatagtgaaaacttacggtatttatttaaaggaggtttttatgcaacctaggccaatatttttctaattcacagttaggtagttgtttatctttcataatctttcaaatccaaaattaatattcctgatgatttgaaaggcctagcattttatttataaaatttgtttgaaaaatatgattctatatagcatgtaattaatatttgatctggaaatgttgcatttcttttaaaaattttgggctctgttccagcctaaagcctttaagagcaagaatggtcccatgtgcagatctagctaacttaacattctgacatttcatgt
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]