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2024-05-19 14:42:35, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_026096732            2043 bp    mRNA    linear   VRT 09-AUG-2018
DEFINITION  PREDICTED: Dromaius novaehollandiae ST6 N-acetylgalactosaminide
            alpha-2,6-sialyltransferase 5 (ST6GALNAC5), mRNA.
ACCESSION   XM_026096732
VERSION     XM_026096732.1
DBLINK      BioProject: PRJNA484763
KEYWORDS    RefSeq.
SOURCE      Dromaius novaehollandiae (emu)
  ORGANISM  Dromaius novaehollandiae
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
            Coelurosauria; Aves; Palaeognathae; Casuariiformes; Dromaiidae;
            Dromaius.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NW_020452117.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Dromaius novaehollandiae Annotation
                                           Release 100
            Annotation Version          :: 100
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.1
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Dromaius novaehollandiae"
                     /mol_type="mRNA"
                     /isolate="6597"
                     /specimen_voucher="MCZ:Cryo:6597"
                     /db_xref="taxon:8790"
                     /chromosome="Unknown"
                     /sex="male"
                     /tissue_type="muscle"
                     /dev_stage="adult"
                     /collected_by="Dan Janes"
     gene            1..2043
                     /gene="ST6GALNAC5"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 ESTs, 9 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 20 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:112981245"
     CDS             6..746
                     /gene="ST6GALNAC5"
                     /codon_start=1
                     /product="alpha-N-acetylgalactosaminide
                     alpha-2,6-sialyltransferase 5"
                     /protein_id="XP_025952517.1"
                     /db_xref="GeneID:112981245"
                     /translation="
MHCKSCALVTSSGHLLGSKQGDKIDQTECVIRMNDAPTRGYGKDVGNKTSLRVIAHSSIQRILRNRNELLNMSHGAVFIFWGPSSYMRRDGKGLVYNNLQLMNQILPQLKAYMISRHKMLQFDDLFKRETGKDRKISNTWLSTGWFTMTIALELCDRINVYGMVPPDFCRDPNHLSVPYHYYEPLGPDECTMYISHERGRKGSHHRFITEKRVFENWARTFNIHFFQPDWKPEPLTVNHPEIKMVG"
     misc_feature    9..554
                     /gene="ST6GALNAC5"
                     /note="Glycosyltransferase family 29 (sialyltransferase);
                     Region: Glyco_transf_29; pfam00777"
                     /db_xref="CDD:425864"
ORIGIN      
taaaaatgcactgcaagagttgtgcattggtaaccagttctggacaccttctgggaagtaaacaaggtgacaaaatcgaccagacagagtgtgtaatacgaatgaacgatgcacctactcgaggttacggaaaagatgtgggaaacaaaacaagccttcgagtcattgcacactctagcattcagaggattttacgaaatcgcaacgaactcttaaatatgagccatggagctgtatttatcttctggggtcctagcagctacatgaggagagatggaaaaggcttggtgtataacaacctgcagctgatgaatcagatactgcctcaattaaaagcatatatgatttctcgccacaagatgcttcaatttgatgacctttttaaacgggaaaccgggaaagacaggaagatatccaacacttggcttagcacgggctggttcacaatgactatcgcattagagctgtgtgacaggataaatgtttatggcatggtgccaccggatttctgcagggatcctaatcatctttcagtaccttatcattattatgaacctttgggacctgatgaatgcacaatgtacatttcccatgagcggggccgaaagggcagccatcatcgtttcatcacagagaaacgagtgtttgagaactgggcacggacattcaatattcactttttccaaccagactggaaaccagaaccacttactgtaaatcaccctgagattaaaatggtgggctgaaggatgaacacagaagactgcaatcacagtcacctactgtatcagctttcagggtgttggaccttctgggacagcaaggcaacctagatgagaagagtaacaggatttgcagatgagaactgcaacaacaatcaggaagttatgagggagtatatcaagagtaccttgtgtcaaactgtaaattaaaccagtatatagccttctctggccatctgacttcctgtatgtgtatgtgatttgtgaaaaacaacttgagtatcattacgggatggttaatcattatggttttttaaagtacaatgccactgaattttcatagtgaaaacttacagtacttatttaatggaggtttttatgcaacctaggccagtatttttctaattcacaattatgtggttgtttatctttcataatccttcaaatccaaaattaatattgctgatggtttgaaaggcctagctttttatttataaattttgtttgcaaaaaaaaaaaaaaaggattctatatagcatgtaattaatatttggtctggaaatttaaatatttggggctctgttccagcctgaagcctttaacagcaagaatggtcccacgtgcaaatctagctaactctacagtttgacacctcattttaatatgacaatggtagacaaaattccttttgacatgaacgcgcatttgttgctatgctatcaaattgctgttttttttaattagaggtggagggaaggagggcaaagtttatctgaaaaatcactgtctatagcaacatgtttgcaatgaagaagcgaccagctggggtcagagaagattgcattcaattttgcttcttacagtcctgcaagagactgaagcagcaaccatattcctgaagtaacaaacaaactacaaaccagacaacaatggcttgtaatgacatgaccaagtttttgaaatcaagaagctacactaccaggtactataatactgaccataccagccaaaaacaggactcaaatagaccacagcactgcacctcaaaaatctctgccttccacttctccaagatcattgttgagctcctcatagatcctggactgcaatgaagttaggatgtgaaacaagttctgtgagtaaaagattgcctccttaaaaacaacaaagttagcaccacttggcagtttcttcatgaaatgctcgaccatggctaatctctgcaaactaaggtggtgaacaatgctagttctgtatatggaacctcacaatgtgtcttattgggttatatttggcttgtgaataaagaggatttcagtta
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]