2024-05-17 05:17:05, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_024775787 663 bp mRNA linear PLN 26-FEB-2021 DEFINITION PREDICTED: Medicago truncatula protein CLAVATA 3 (LOC112419039), mRNA. ACCESSION XM_024775787 VERSION XM_024775787.2 DBLINK BioProject: PRJNA702529 KEYWORDS RefSeq. SOURCE Medicago truncatula (barrel medic) ORGANISM Medicago truncatula Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Trifolieae; Medicago. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_053043.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 26, 2021 this sequence version replaced XM_024775787.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Medicago truncatula Annotation Release 102 Annotation Version :: 102 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..663 /organism="Medicago truncatula" /mol_type="mRNA" /cultivar="Jemalong A17" /db_xref="taxon:3880" /chromosome="2" /tissue_type="leaves" /country="Australia" gene 1..663 /gene="LOC112419039" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 13 samples with support for all annotated introns" /db_xref="GeneID:112419039" CDS 192..494 /gene="LOC112419039" /codon_start=1 /product="protein CLAVATA 3" /protein_id="XP_024631555.1" /db_xref="GeneID:112419039" /translation="
MASKFIFSSVFLLVLFCLLFIKETSAGCNTAYACSYANGESLKMFQNRKMLSGLKVSLEGSSTKIKYGEKTVVGELRKVPTGPDPLHHHNIGNPIKPENP"
misc_feature <294..>488 /gene="LOC112419039" /note="Protein Kinases, catalytic domain; Region: PKc_like; cl21453" /db_xref="CDD:451246" ORIGIN
gtacagataatgcttcctcattagtgtctttaatcattaatttcttcccaaatggctgcaacacccatcattctaatttctaatttttaattattaaatccttgaattatcccaccattataaatatatgtgtcttcttcttcacaacatgcatattaaattaacctagctacgtatctccaatatttataatggcttctaagttcatcttttcttctgtctttttacttgttcttttctgcttgctttttatcaaggagacttctgcaggttgcaatactgcatatgcatgctcttatgctaatggcgaaagtctcaaaatgttccaaaacaggaagatgctgtctggtttgaaggttagtttggaaggatcttcaaccaagatcaagtatggtgaaaagacagtggttggagagttgagaaaggttcctacaggtccagatccactgcaccatcataacattggcaaccctattaagcctgaaaacccttgaactcattgaagaaaaactagtttctatgttttggtctagtatttgttacatgtagtcatgtgaaaatggaagtttaagtctaagtaattttgtttgttttgtcattttgtagaaacatgtagcttgttaatttctgttctttcttgtgtttattaagaagtttgtaagc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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