2024-05-16 19:48:26, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_023785205 311 bp mRNA linear PLN 02-FEB-2018 DEFINITION PREDICTED: Capsella rubella protein CLAVATA 3 (LOC111831232), mRNA. ACCESSION XM_023785205 VERSION XM_023785205.1 DBLINK BioProject: PRJNA230563 KEYWORDS RefSeq. SOURCE Capsella rubella ORGANISM Capsella rubella Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006238920.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Capsella rubella Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..311 /organism="Capsella rubella" /mol_type="mRNA" /cultivar="Monte Gargano" /bio_material="ABRC:CS22697" /db_xref="taxon:81985" /chromosome="Unknown" gene 1..311 /gene="LOC111831232" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins, and 66% coverage of the annotated genomic feature by RNAseq alignments, including 1 sample with support for all annotated introns" /db_xref="GeneID:111831232" CDS 21..311 /gene="LOC111831232" /codon_start=1 /product="protein CLAVATA 3" /protein_id="XP_023640973.1" /db_xref="GeneID:111831232" /translation="
MDSSRSLVLLLLFCLLFLHDASDLTQAHGHVTSLPTRKMMMMNKGSETVGANEEKEEKKIKGLGLNEELRTVPSGPDPLHHHVNPPRQPRNHSLLP"
ORIGIN
gttcagtttctctctaagtaatggattcatcaagaagtcttgtgctactactactcttctgcctcttgttcctccacgatgcttctgatctcacgcaagctcatggccacgttacttcacttcccacccgcaagatgatgatgatgaacaagggtagtgaaactgtaggagcaaatgaagagaaagaagagaagaagatcaaaggtttagggctaaatgaagagctaaggaccgttccttcaggacctgaccctttgcaccatcatgtgaacccaccaagacagccaagaaaccactctcttctcccttga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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