2024-05-19 08:12:58, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_022781668 409 bp mRNA linear PLN 12-OCT-2017 DEFINITION PREDICTED: Vigna radiata var. radiata plasma membrane ATPase 2-like (LOC106763428), transcript variant X1, mRNA. ACCESSION XM_022781668 VERSION XM_022781668.1 DBLINK BioProject: PRJNA301363 KEYWORDS RefSeq. SOURCE Vigna radiata var. radiata (mung bean) ORGANISM Vigna radiata var. radiata Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Vigna. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_028356.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Vigna radiata Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..409 /organism="Vigna radiata var. radiata" /mol_type="mRNA" /variety="radiata" /cultivar="VC1973A" /db_xref="taxon:3916" /chromosome="6" /tissue_type="leaf" gene 1..409 /gene="LOC106763428" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 5 samples with support for all annotated introns" /db_xref="GeneID:106763428" CDS 161..406 /gene="LOC106763428" /codon_start=1 /product="plasma membrane ATPase 2-like" /protein_id="XP_022637389.1" /db_xref="GeneID:106763428" /translation="
MITEHKYEIVKRLQARKHICGMTGDGVNDAPALKKAGIGIVVADATDAARSASDIVLTEPGLSVIFIIVLVNVAPEKRIKY"
misc_feature <170..>355 /gene="LOC106763428" /note="plasma-membrane proton-efflux P-type ATPase; Region: ATPase-IIIA_H; TIGR01647" /db_xref="CDD:273731" ORIGIN
cttggctttctccgttttatacaagacgttctagatggaaacaaagagagtataggtggcccatggcagtttattggcctttggcctctgtttgacccaccctaggcatgacagtgcagaaacaatacgcagggcacttaaccttggagtcaatgttaaaatgattacagagcacaagtacgagattgtgaaacgtttgcaagctaggaaacatatttgtggaatgactggtgatggagtgaatgacgcacctgcactcaagaaggccggcattggtatagttgttgctgacgcaactgatgcagctcggagtgcatctgatattgttttaacagaacctggccttagtgttattttcattattgtattagtgaatgttgctcctgaaaagagaataaaatattagttc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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