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2024-05-16 17:27:02, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_021462134             713 bp    mRNA    linear   PLN 13-JUN-2017
DEFINITION  PREDICTED: Sorghum bicolor protein FLORAL ORGAN NUMBER2-like
            (LOC110435999), mRNA.
ACCESSION   XM_021462134
VERSION     XM_021462134.1
DBLINK      BioProject: PRJNA38691
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Sorghum bicolor (sorghum)
  ORGANISM  Sorghum bicolor
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD
            clade; Panicoideae; Andropogonodae; Andropogoneae; Sorghinae;
            Sorghum.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_012874.2) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Version          :: Sorghum bicolor Annotation Release
                                           101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 7.4
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 38% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..713
                     /organism="Sorghum bicolor"
                     /mol_type="mRNA"
                     /cultivar="BTx623"
                     /db_xref="taxon:4558"
                     /chromosome="5"
     gene            1..713
                     /gene="LOC110435999"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein, and 72% coverage of the
                     annotated genomic feature by RNAseq alignments"
                     /db_xref="GeneID:110435999"
     CDS             1..360
                     /gene="LOC110435999"
                     /codon_start=1
                     /product="protein FLORAL ORGAN NUMBER2-like"
                     /protein_id="XP_021317809.1"
                     /db_xref="GeneID:110435999"
                     /translation="
MARIFLCLLAAAYCCIALLPPPAQARRHGLQQQQAAGAGGRRRLHLSPQVPEPRFFVPKQAAAAERRGEPVSMKARPRAAAAWSVRPELRAVPGGPDPLHHHGGSPSRRPEQDRTPRSP"
ORIGIN      
atggcccggatcttcctgtgcttattggcggcggcgtactgctgcatcgcgctgcttccgccgccggcgcaggcccgtcgccatggcctgcagcagcagcaggcagccggcgccggcggccgccgcaggcttcatctgtcgccacaagtgccagagccgcgcttctttgttcccaaacaggcggcggcggcggagcgacgcggcgagccggtgagtatgaaggcgaggccgcgggcggcggcagcgtggagcgtgaggccggagctgagggcggtgcccggaggcccggacccgctgcaccaccacggcggcagccccagcaggcggccggagcaggaccgcaccccgcggtccccgtgacgccccccggccggcaagcatggctaggctacctgcgccagaggaccttctttcccggccaccggcgcctgcaactgcaatcctgcacggtcacctcgtgcgctggatcctgtgcgcggggagactctgtggcctcgcctgtggccgcgcgtcctcgccctgcacgtgtctggctggctgcctaccgagttgaggtgagtgaggcactgaggctgctggcactggcatgggctgcgcatggtgaatggttgagggcgttttggtaatatatactgtatgcagttttatgtaccaagtactacgcaatgtatacaaaatggtacgacatgggtttcgtcccatgtggatcgaaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]