LOCUS       XM_021216032            1858 bp    mRNA    linear   ROD 18-JUN-2019
DEFINITION  PREDICTED: Mus pahari osteomodulin (Omd), mRNA.
ACCESSION   XM_021216032
VERSION     XM_021216032.2
DBLINK      BioProject: PRJNA387191
KEYWORDS    RefSeq.
SOURCE      Mus pahari (shrew mouse)
  ORGANISM  Mus pahari
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Coelomys.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_034605.1) annotated using gene prediction method: Gnomon,
            supported by mRNA evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jun 18, 2019 this sequence version replaced XM_021216032.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Mus pahari Annotation Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.2
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1858
                     /organism="Mus pahari"
                     /mol_type="mRNA"
                     /db_xref="taxon:10093"
                     /chromosome="16"
                     /sex="female"
                     /tissue_type="tail"
     gene            1..1858
                     /gene="Omd"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 mRNAs, 5 Proteins, and 93%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 1 sample with support for all
                     annotated introns"
                     /db_xref="GeneID:110334165"
     CDS             366..1637
                     /gene="Omd"
                     /codon_start=1
                     /product="osteomodulin"
                     /protein_id="XP_021071691.1"
                     /db_xref="GeneID:110334165"
                     /translation="

MGFLSPIYVLFFCFGVRVYCQYEAYRWDEDYDQEPNEDYEPEFQFHQNIEYEVPFYHNILGCAKECFCPTNFPTSMYCDNRKLKTIPNIPMHIQQLNLQFNDIEAVTANSFINATHLKEINLSHNKIKSQKIDYGVFAKLSNLQQLHLEHNNLEEFPFPLPKSLERLLLGYNEISTLPTNAMDGLVNVTMLDLCYNHLSDSMLKEKTLSKMEKLMQLNLCNNRLESMPPGLPSSLMYLSLENNSISSIPDNYFDKLPKLHALRISHNKLEDIPYDIFNLSNLIELNVGHNKLKQAFYIPRNLEHLYLQNNEIESINVTMICPSPDPLHHHHLTYLRVDQNKLKEPISSYIFFCFPRIHSIYYGEQRSTNGETIQLKTQVFRSYQEEEEEDDHDSQDNTLEGQEVSDEHFNSHYYEMQEWQDTI"

     misc_feature    <567..>1271
                     /gene="Omd"
                     /note="type III secretion system effector E3 ubiquitin
                     transferase SlrP; Region: PRK15370"
                     /db_xref="CDD:185268"
     misc_feature    585..641
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    645..713
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    714..791
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    792..854
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    855..926
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    927..1004
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1005..1067
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1068..1139
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1140..1208
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1203..1391
                     /gene="Omd"
                     /note="Leucine rich repeat; Region: LRR_8; pfam13855"
                     /db_xref="CDD:404697"
     misc_feature    1209..1268
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
     misc_feature    1359..1418
                     /gene="Omd"
                     /note="leucine-rich repeat [structural motif]; Region:
                     leucine-rich repeat"
                     /db_xref="CDD:275380"
ORIGIN      

tttagtcttgtttgcctttcatattagagaaaattcttgccacacctcaaaccaaaattaaggagaaaagaaagaagttagccacataaatctgaccaagagcacaaacatcttactttgaatccacaaaattctgtataatgaaaagaagtacaaaattttaattcaacccaagtgttttccaagcagattgtatttacttaaattgctacagtaattcaaaggacagccctgtctgcacacagagttactgtggatttttaagaaacttcgctaaagaatttaggcatttctgattcagttaaaggattgccaattcatcaattcctgaaactaaagcaatctcaacaggacaagaaaagaaaatgggctttttaagtccaatatatgtccttttcttctgttttggagttagagtatactgccaatatgaagcttaccgatgggatgaagattatgaccaagagccaaatgaggattatgagccagaattccaatttcatcaaaatattgaatatgaagttcccttttatcataatattttaggttgcgctaaggagtgcttctgtccaactaactttccaacatcaatgtactgtgacaatcgtaaactcaagactatcccaaatatcccaatgcacattcagcaactcaaccttcagttcaatgacattgaggctgtgactgcaaattcattcatcaatgcaactcatcttaaagaaattaaccttagccacaacaaaattaaatctcaaaagattgattatggtgtgtttgctaaactttcaaatctacaacaacttcatctagagcacaataacctagaagaatttccatttccacttcctaaatctctggaaagactccttcttggttataatgagatctccacacttccaacaaatgccatggacgggctggtgaatgtgactatgcttgatctctgctataatcatctttctgattcgatgttaaaagaaaagaccctttccaaaatggaaaaattaatgcagctcaacctatgtaataacagattagaatcaatgccccctggattgccttcatcacttatgtatctatctttagaaaataattcaatctcatctataccagacaattattttgacaaacttccaaaacttcatgctctaagaatatcacacaacaaactggaagacattccatatgacatctttaatctttccaatcttatagaactcaacgttggacacaataaattgaagcaagcattctacattccaaggaatttggaacatctatacctacaaaataatgaaatagaaagcatcaatgtgacaatgatatgtccttctcctgatccactacaccatcaccatttaacataccttcgtgtggaccaaaataagctgaaagaaccaataagttcatacatcttcttctgcttccctcgcatacacagtatttattacggtgagcagaggagtactaatggtgaaacgattcaactgaagacccaagttttcaggagctaccaagaggaggaagaggaagatgaccacgacagtcaggacaacactcttgagggtcaagaagtatcagacgagcattttaattctcattactatgaaatgcaagagtggcaagatactatataggtacacatttatgcctccataaagccttactaattacaaatataaacacgtaactgctcataataatatatctacaagtatgtgttagtataaagatcagaactgcatttaagatggtgaaaatggctttacttcataggcttagagcttactaaaaatggtgcaaatcttaagaaatataaaatagaatggtaagtgggaataaaaaaaactaagctcaa

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