2024-05-18 13:17:43, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_021011992 1094 bp mRNA linear PLN 11-MAY-2017 DEFINITION PREDICTED: Arabidopsis lyrata subsp. lyrata root meristem growth factor 5 (LOC9300188), mRNA. ACCESSION XM_021011992 VERSION XM_021011992.1 DBLINK BioProject: PRJNA49545 KEYWORDS RefSeq. SOURCE Arabidopsis lyrata subsp. lyrata ORGANISM Arabidopsis lyrata subsp. lyrata Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_003302548.1) annotated using gene prediction method: Gnomon, supported by mRNA evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Arabidopsis lyrata subsp. lyrata Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.4 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1094 /organism="Arabidopsis lyrata subsp. lyrata" /mol_type="mRNA" /sub_species="lyrata" /bio_material="NASC:donor number MN47" /db_xref="taxon:81972" /chromosome="Unknown" gene 1..1094 /gene="LOC9300188" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 16 samples with support for all annotated introns" /db_xref="GeneID:9300188" CDS 663..926 /gene="LOC9300188" /codon_start=1 /product="root meristem growth factor 5" /protein_id="XP_020867651.1" /db_xref="GeneID:9300188" /translation="
MSSIHVASFLLLFLLLHLADSRHLDNVHITESRFSLVKDQNVVSGSTSKEPVKVSRFVPGAVKHHHRRSPLLFADYPKPSTRPPRHN"
ORIGIN
tctcagggaacattcttggtccagatgttgggttattggttcttgaagctctttactttgaactaacatgtgttatttgttttagaaacaagcaggatttgagcaattcaagaggactttttgaagacaagatgtctcggagattgtgtcaaagctcaaatagtggtgtgaacagtcatcgtcaacctccaaaccattctcgaggcagacaaaaccattaaggtaattaaactaacgccttcaaaaagtgctttaagttttacatataataatgcagttcgaaactagcttgcattttcttaatagaatatttaccgtggcggtcggtaagttttggggattggtctcaaatgagatgtgtaagagacaagaagtagtaaatcactcgtttttcaccgaggtttaaatgtccttttccttttgtagtttctttctctctttttgactcatctttggcttttcccatgagcttttccagcacattcatctggattgattaaaaatacacttgtttattctgtgtttattctggggtttaattcttactttcaaatacttatgtgtgaacttactcttattatataatgtcttctacctactaagtcctttaacgtttcataatcctcataatcgttaagccttgtgtgactgtttctgttcaaatgagctcaatccatgttgcttctttccttctcttgtttctcctcttgcatcttgctgattctcgtcacctcgacaatgtccacattacagagtctcggttttcgcttgtcaaggatcaaaacgttgtctctggttcgacatctaaagaaccggttaaagtttctcggtttgtgccgggtgcagtgaagcaccaccatcgtcgttcaccgctcttatttgcagattatccgaagccgtccactcggcctccacgccataactgaaacctctctctttagtttttttcatctttagtgtttttgtatttgagagagtacataagtcttagcaattttcttaatatgtttccaaatgtgggatttttttgaagtataggttcatgttatcctttctagctgacaaaatctatctattttgagtaagttttgcaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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