2024-05-19 08:12:56, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_020549347 365 bp mRNA linear PLN 31-AUG-2020 DEFINITION PREDICTED: Zea mays cation-transporting ATPase HMA5-like (LOC103647296), mRNA. ACCESSION XM_020549347 VERSION XM_020549347.3 DBLINK BioProject: PRJNA655717 KEYWORDS RefSeq. SOURCE Zea mays ORGANISM Zea mays Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Andropogonodae; Andropogoneae; Tripsacinae; Zea. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_050097.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Aug 31, 2020 this sequence version replaced XM_020549347.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Zea mays Annotation Release 103 Annotation Version :: 103 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..365 /organism="Zea mays" /mol_type="mRNA" /cultivar="B73" /db_xref="taxon:4577" /chromosome="2" gene 1..365 /gene="LOC103647296" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 100% coverage of the annotated genomic feature by RNAseq alignments, including 247 samples with support for all annotated introns" /db_xref="GeneID:103647296" CDS 71..328 /gene="LOC103647296" /codon_start=1 /product="cation-transporting ATPase HMA5-like" /protein_id="XP_020404936.1" /db_xref="GeneID:103647296" /translation="
MDLGDFLTLVASAEASSEHPLAKAILDYALHFHFFGKLPSSKDGIEQRKDKVLSQWLLEAEDFSAVSGKGVQCSINGKHVLVSHR"
misc_feature <71..>316 /gene="LOC103647296" /note="Haloacid Dehalogenase-like Hydrolases; Region: HAD_like; cl21460" /db_xref="CDD:451251" ORIGIN
ggtttttgataaaacagggacactaacacaaggaaaggctgttgtaacagctgcaaaggttttctcgggaatggacctaggagatttcctcacgctggttgcatcagcagaggcaagcagtgagcatcctcttgccaaagctattttggactatgcattgcatttccatttctttggcaagcttccttcatcaaaagatggcattgagcaacgaaaagacaaggtattatcccagtggctgcttgaagctgaagacttctctgcagtatctggcaaaggagttcagtgctcgatcaatgggaagcatgttttggtgagtcataggtgaatgtcatgcttccatatcccttttaatttacattgtc
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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