2024-05-16 15:15:05, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_018626970 779 bp mRNA linear PLN 08-JUN-2023 DEFINITION PREDICTED: Raphanus sativus uncharacterized LOC108853560 (LOC108853560), mRNA. ACCESSION XM_018626970 VERSION XM_018626970.2 DBLINK BioProject: PRJNA344915 KEYWORDS RefSeq; includes ab initio. SOURCE Raphanus sativus (radish) ORGANISM Raphanus sativus Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Raphanus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_079514) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Jun 8, 2023 this sequence version replaced XM_018626970.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_000801105.2-RS_2023_06 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.1 Annotation Method :: Best-placed RefSeq; Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 06/01/2023 ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 42% of CDS bases ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..779 /organism="Raphanus sativus" /mol_type="mRNA" /cultivar="WK10039" /db_xref="taxon:3726" /chromosome="4" /tissue_type="leaf" gene 1..779 /gene="LOC108853560" /note="uncharacterized LOC108853560; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108853560" CDS 1..633 /gene="LOC108853560" /codon_start=1 /product="uncharacterized protein LOC108853560" /protein_id="XP_018482472.2" /db_xref="GeneID:108853560" /translation="
MDDGEYALIFYMPELRYRLQGSDCYDQGFSRLAKLCHGAGEDRNVTDLLPGFQDSYVPRARNQISDFLSKTARSFHRELLFIATNKKKINDTPSSSLQPINNTPILLSHYHIKEQFLSFIHSISLYKMDSRTLVLVLLVCLIFLHDASDITHANANFHALPIRKMMVMEKENEWGGANGNEELRTVPSGPDPLHHHVNPPRQPRTDSHLP"
ORIGIN
atggacgatggagaatatgctttaatattctacatgccagagcttcggtacagactgcaaggatctgattgctatgatcaaggattctcacgcttggccaaactttgccacggagctggagaagatagaaacgttactgatctgcttcccggatttcaagattcttatgttcctcgagcgcgcaatcagatttcagattttttatctaaaacagctagatccttccacagggagttacttttcattgcaaccaataaaaaaaaaataaacgataccccttcctcctccttgcagcctataaataatacccccattctcttatctcattaccacatcaaagaacaatttctatcgtttattcactctatctctctctacaaaatggattcgaggactctggtgctagtgctgctcgtttgcctcatcttcctgcatgatgcttctgatatcactcacgccaatgccaattttcatgcacttcccattcgcaagatgatggtgatggagaaggagaatgaatggggaggagcaaatggaaatgaagagttaaggactgttccttcaggacctgaccctttgcatcatcatgtgaaccccccaagacagccacggaccgactctcatctcccttaaaacgtcctttcttttgtttctttaatgtagttcgtattgtaaattaactcttctgtttaatcagttttatgttgggagattttcagtttaatctctcactttccctaaggttgtgatgatggttaatgtaagataagcacaacttt
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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