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2024-05-19 08:13:12, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_016871331             465 bp    mRNA    linear   PLN 25-APR-2021
DEFINITION  PREDICTED: Gossypium hirsutum plasma membrane ATPase 2-like
            (LOC107938239), mRNA.
ACCESSION   XM_016871331
VERSION     XM_016871331.1
DBLINK      BioProject: PRJNA713846
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Gossypium hirsutum (cotton)
  ORGANISM  Gossypium hirsutum
            Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
            Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae;
            Pentapetalae; rosids; malvids; Malvales; Malvaceae; Malvoideae;
            Gossypium.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_053435.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI
            Annotation Status           :: Full annotation
            Annotation Name             :: Gossypium hirsutum Annotation
                                           Release 101
            Annotation Version          :: 101
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 8.6
            Annotation Method           :: Best-placed RefSeq; Gnomon
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 100% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..465
                     /organism="Gossypium hirsutum"
                     /mol_type="mRNA"
                     /isolate="1008001.06"
                     /db_xref="taxon:3635"
                     /chromosome="A12"
     gene            1..465
                     /gene="LOC107938239"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 2 Proteins"
                     /db_xref="GeneID:107938239"
     CDS             1..465
                     /gene="LOC107938239"
                     /codon_start=1
                     /product="plasma membrane ATPase 2-like"
                     /protein_id="XP_016726820.1"
                     /db_xref="GeneID:107938239"
                     /translation="
MGVCGYNPFARSFKAFSAETIHLALNLGVDVKVITSDELASGKETGYRLSGSHEHKYEIVMRLQQMTYICGMTGDGVNDAPALKKAGIEIAVVDGTDVARGASDIVLTEPGLSVIVSDVLTSRAIFQIMKNYTCCLHYYPNCLGIYVSCSYLEI"
     misc_feature    <49..>399
                     /gene="LOC107938239"
                     /note="plasma-membrane proton-efflux P-type ATPase;
                     Region: ATPase-IIIA_H; TIGR01647"
                     /db_xref="CDD:273731"
ORIGIN      
atgggagtttgtgggtataatccctttgctcgatccttcaaggcttttagtgcggagacaattcatctggctctaaatcttggtgtcgatgtcaaggtgatcactagtgatgaactagccagtggcaaagaaactggttacaggctcagtggttcccatgagcacaaatatgagattgtaatgaggttacagcaaatgacttatatttgtggcatgactggagatggtgtgaatgatgcacctgcgcttaagaaggcaggcattgaaattgcagtggttgatggaactgatgtagctcgtggtgcatcagatatagtgctaacagaaccagggcttagtgtcattgttagtgatgttctaacaagcagagccatttttcaaataatgaaaaactatacatgttgtctccattactatccaaattgtcttgggatttatgtttcttgctcttatttggaaatttga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]