2024-05-19 03:29:58, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_016757042 1563 bp mRNA linear PLN 18-APR-2022 DEFINITION Spizellomyces punctatus DAOM BR117 uncharacterized protein (SPPG_08894), mRNA. ACCESSION XM_016757042 VERSION XM_016757042.1 DBLINK BioProject: PRJNA319336 BioSample: SAMN00716787 KEYWORDS RefSeq. SOURCE Spizellomyces punctatus DAOM BR117 ORGANISM Spizellomyces punctatus DAOM BR117 Eukaryota; Fungi; Fungi incertae sedis; Chytridiomycota; Chytridiomycota incertae sedis; Chytridiomycetes; Spizellomycetales; Spizellomycetaceae; Spizellomyces. REFERENCE 1 (bases 1 to 1563) AUTHORS Russ,C., Cuomo,C., Shea,T., Young,S.K., Zeng,Q., Koehrsen,M., Haas,B., Borodovsky,M., Guigo,R., Alvarado,L., Berlin,A., Bochicchio,J., Borenstein,D., Chapman,S., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Thomson,T., Walk,T., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Lander,E. and Nusbaum,C. CONSRTM The Broad Institute Genome Sequencing Platform TITLE The Genome Sequence of Spizellomyces punctatus strain DAOM BR117 JOURNAL Unpublished REFERENCE 2 (bases 1 to 1563) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (15-APR-2022) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 1563) AUTHORS Russ,C., Cuomo,C., Shea,T., Young,S.K., Zeng,Q., Koehrsen,M., Haas,B., Borodovsky,M., Guigo,R., Alvarado,L., Berlin,A., Bochicchio,J., Borenstein,D., Chapman,S., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Thomson,T., Walk,T., White,J., Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N., Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Lander,E. and Nusbaum,C. CONSRTM The Broad Institute Genome Sequencing Platform TITLE Direct Submission JOURNAL Submitted (14-AUG-2009) Broad Institute of MIT and Harvard, 7 Cambridge Center, Cambridge, MA 02142, USA COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_015971538). FEATURES Location/Qualifiers source 1..1563 /organism="Spizellomyces punctatus DAOM BR117" /mol_type="mRNA" /strain="DAOM BR117" /db_xref="taxon:645134" /chromosome="Unknown" gene 1..1563 /locus_tag="SPPG_08894" /db_xref="GeneID:27692019" CDS 1098..1433 /locus_tag="SPPG_08894" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_016611543.1" /db_xref="GeneID:27692019" /translation="
MDASGRWHIGLCEDFSEHPLKIGFSAASNESFDKGFLRSEVECGARFMPTLYTKSLPAGELVCYLDLSTIVYNIQRNPYDLRVPAFEDGRIDLPAIPHLPKNRHPLRDIIT"
ORIGIN
gaagcatttgcattgagtagagtcggatatatttttggacaagaaagaagcgaatatgagatgtttccggtgagaatccgcttctcattttcatcgctcccttcaggaaacgggtatgtggagagccactccctaaagacaaggtcagctacataaaatccattcattggactactgatattatctacctcacgagcaagaggtggtgagacctctcttccacgatgtgccgcgcacaaagggcaaagcgttctgtagagggcctacgggcttccacagagcacttaaccccggtgtccgggtcaaaagcctcgcaagttgtccatcctctacgtgctatgaatgctgtgagaataggcaagtagactccaagagcattgactattcaaactcacgcgacgtgaatttgccgccaacgttgggattaatcccaacaacttccacaaagtatgcctccgactcggcattgttgggtactttctcaaaggctacagcaagctgaccggggggaacttgacccaatgctttatataaaagaatcctctacttgcacgtgggaatactttcatctttttctttctgcaacaaggagaaagaaagaaagaaagaaagaaagaaagagaggcacttttctttttctctattacaacaacaacaacaactcgttattacaagacctatactatgatggtccaacctttgcgaggggtgtcttgtctttgacgtgacacacggacttggactgctgggatgaatattggacacgcggaacacgtctttccatctccccccctttccatctcactcgttttggcaaaaagggttccctgcactccccgtggactcttgcgtgctgatgacagattgacctcactttcgtacaacgagaggaacgcccaggtctggacgcccaatgattagcaaatacgcaattggacggaaacattgaagattacaaaggacacaaaaatggatgcatctggcaggtggcatattggactttttgagaactattcccttttcgtgaagggagcgatgaaatagagaagcggattctcagcggaaacatttacaagaagattacaaaggacacgaagatggatgcatcaggcagatggcatattggactctgtgaggacttttcggaacatccgctcaaaatcgggttttctgcggcatccaacgaatccttcgacaagggatttttaaggtctgaagtagaatgtggagcccgctttatgcccacgctctacacaaagagcctacctgctggtgagcttgtctgctatctggatttgtccacgatagtatataatatccagcgcaacccgtatgatttgagggttcctgcttttgaggatggaagaattgatctacccgccattcctcatctgccaaaaaaccgtcaccctctccgtgatatcattacgtaacagtgcactctgtatgtaacctgcaaggattggcagttagataacaaattctacgtccccagctgcagcattaatagcactcaaaaatgttacttgatgttaatataacgcaacaactaatcgctgctgc
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DBCLS
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Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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