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2024-05-19 03:29:56, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_014034844             339 bp    mRNA    linear   PLN 10-SEP-2015
DEFINITION  Monoraphidium neglectum sodium/potassium-transporting ATPase
            subunit alpha mRNA.
ACCESSION   XM_014034844
VERSION     XM_014034844.1
DBLINK      BioProject: PRJNA293989
            BioSample: SAMN02981574
KEYWORDS    RefSeq.
SOURCE      Monoraphidium neglectum
  ORGANISM  Monoraphidium neglectum
            Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes;
            Chlorophyceae; CS clade; Sphaeropleales; Selenastraceae;
            Monoraphidium.
REFERENCE   1  (bases 1 to 339)
  AUTHORS   Bogen,C., Al-Dilaimi,A., Albersmeier,A., Wichmann,J., Grundmann,M.,
            Rupp,O., Lauersen,K.J., Blifernez-Klassen,O., Kalinowski,J.,
            Goesmann,A., Mussgnug,J.H. and Kruse,O.
  TITLE     Reconstruction of the lipid metabolism for the microalga
            Monoraphidium neglectum from its genome sequence reveals
            characteristics suitable for biofuel production
  JOURNAL   BMC Genomics 14, 926 (2013)
   PUBMED   24373495
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 339)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-SEP-2015) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 339)
  AUTHORS   Bogen,C.C., Al-Dilaimi,A.A., Albersmeier,A.A., Wichmann,J.J.,
            Grundmann,M.M., Rupp,O.O., Lauersen,K.K., Blifernez-Klassen,O.O.,
            Kalinowski,J.J., Goesmann,A.A., Mussgnug,J.J. and Kruse,O.O.
  TITLE     Direct Submission
  JOURNAL   Submitted (18-NOV-2013) Department of Biology/Center for
            Biotechnology, Bielefeld University, Universitaetsstrasse 27,
            Bielefeld, NRW 33615, Germany
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_014006976).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..339
                     /organism="Monoraphidium neglectum"
                     /mol_type="mRNA"
                     /strain="SAG 48.87"
                     /isolation_source="basin in greenhouse"
                     /type_material="reference material of Monoraphidium
                     neglectum"
                     /db_xref="taxon:145388"
                     /chromosome="Unknown"
                     /country="Germany: Koethen"
                     /collection_date="1980"
                     /note="habitat freshwater"
     gene            <1..>339
                     /locus_tag="MNEG_16686"
                     /db_xref="GeneID:25734470"
     CDS             1..339
                     /locus_tag="MNEG_16686"
                     /EC_number="3.6.3.9"
                     /codon_start=1
                     /product="sodium/potassium-transporting ATPase subunit
                     alpha"
                     /protein_id="XP_013890298.1"
                     /db_xref="GeneID:25734470"
                     /translation="
MSDERVGAAVVTGAQIREIKTEEEWDDILCKPEIVFARTSPQQKLQIVENLQRLGEVVAVTGDGVNDAPALKKAQIGVAMGKGGSDRSVRAAPVLCSLDLCQMWLVRRQTSF"
     misc_feature    <22..>276
                     /locus_tag="MNEG_16686"
                     /note="sodium or proton efflux -- potassium uptake
                     antiporter, P-type ATPase, alpha subunit; Region:
                     ATPase-IIC_X-K; TIGR01106"
                     /db_xref="CDD:273445"
ORIGIN      
atgtctgacgagcgcgttggggccgccgtcgtcaccggcgcccagatcagggagatcaagaccgaggaggagtgggacgacatcctctgcaagcctgagatcgtgtttgcgcgcaccagcccccagcagaagctgcagatcgtggagaacctgcagcgcctcggagaggtggtggctgtgacgggtgatggcgtgaacgacgcgccggcactcaagaaggctcagatcggtgttgccatgggcaagggcggctcggaccgctccgtccgcgccgcccccgtgctttgctctttggatttgtgtcagatgtggctcgtgaggcggcagacatcgttctga
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]