2024-05-19 03:29:56, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_014034844 339 bp mRNA linear PLN 10-SEP-2015 DEFINITION Monoraphidium neglectum sodium/potassium-transporting ATPase subunit alpha mRNA. ACCESSION XM_014034844 VERSION XM_014034844.1 DBLINK BioProject: PRJNA293989 BioSample: SAMN02981574 KEYWORDS RefSeq. SOURCE Monoraphidium neglectum ORGANISM Monoraphidium neglectum Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae; CS clade; Sphaeropleales; Selenastraceae; Monoraphidium. REFERENCE 1 (bases 1 to 339) AUTHORS Bogen,C., Al-Dilaimi,A., Albersmeier,A., Wichmann,J., Grundmann,M., Rupp,O., Lauersen,K.J., Blifernez-Klassen,O., Kalinowski,J., Goesmann,A., Mussgnug,J.H. and Kruse,O. TITLE Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production JOURNAL BMC Genomics 14, 926 (2013) PUBMED 24373495 REMARK Publication Status: Online-Only REFERENCE 2 (bases 1 to 339) CONSRTM NCBI Genome Project TITLE Direct Submission JOURNAL Submitted (10-SEP-2015) National Center for Biotechnology Information, NIH, Bethesda, MD 20894, USA REFERENCE 3 (bases 1 to 339) AUTHORS Bogen,C.C., Al-Dilaimi,A.A., Albersmeier,A.A., Wichmann,J.J., Grundmann,M.M., Rupp,O.O., Lauersen,K.K., Blifernez-Klassen,O.O., Kalinowski,J.J., Goesmann,A.A., Mussgnug,J.J. and Kruse,O.O. TITLE Direct Submission JOURNAL Submitted (18-NOV-2013) Department of Biology/Center for Biotechnology, Bielefeld University, Universitaetsstrasse 27, Bielefeld, NRW 33615, Germany COMMENT PROVISIONAL REFSEQ: This record has not yet been subject to final NCBI review. This record is derived from an annotated genomic sequence (NW_014006976). COMPLETENESS: incomplete on both ends. FEATURES Location/Qualifiers source 1..339 /organism="Monoraphidium neglectum" /mol_type="mRNA" /strain="SAG 48.87" /isolation_source="basin in greenhouse" /type_material="reference material of Monoraphidium neglectum" /db_xref="taxon:145388" /chromosome="Unknown" /country="Germany: Koethen" /collection_date="1980" /note="habitat freshwater" gene <1..>339 /locus_tag="MNEG_16686" /db_xref="GeneID:25734470" CDS 1..339 /locus_tag="MNEG_16686" /EC_number="3.6.3.9" /codon_start=1 /product="sodium/potassium-transporting ATPase subunit alpha" /protein_id="XP_013890298.1" /db_xref="GeneID:25734470" /translation="
MSDERVGAAVVTGAQIREIKTEEEWDDILCKPEIVFARTSPQQKLQIVENLQRLGEVVAVTGDGVNDAPALKKAQIGVAMGKGGSDRSVRAAPVLCSLDLCQMWLVRRQTSF"
misc_feature <22..>276 /locus_tag="MNEG_16686" /note="sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit; Region: ATPase-IIC_X-K; TIGR01106" /db_xref="CDD:273445" ORIGIN
atgtctgacgagcgcgttggggccgccgtcgtcaccggcgcccagatcagggagatcaagaccgaggaggagtgggacgacatcctctgcaagcctgagatcgtgtttgcgcgcaccagcccccagcagaagctgcagatcgtggagaacctgcagcgcctcggagaggtggtggctgtgacgggtgatggcgtgaacgacgcgccggcactcaagaaggctcagatcggtgttgccatgggcaagggcggctcggaccgctccgtccgcgccgcccccgtgctttgctctttggatttgtgtcagatgtggctcgtgaggcggcagacatcgttctga
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]