2024-05-20 01:50:39, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_012642752 700 bp mRNA linear PRI 01-JUN-2015 DEFINITION PREDICTED: Propithecus coquereli leucine zipper protein 6 (LUZP6), mRNA. ACCESSION XM_012642752 VERSION XM_012642752.1 DBLINK BioProject: PRJNA281642 KEYWORDS RefSeq; corrected model; includes ab initio. SOURCE Propithecus coquereli (Coquerel's sifaka) ORGANISM Propithecus coquereli Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Strepsirrhini; Lemuriformes; Indriidae; Propithecus. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_012143412.1) annotated using gene prediction method: Gnomon, supported by mRNA and EST evidence. Also see: Documentation of NCBI's Annotation Process ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Propithecus coquereli Annotation Release 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 6.3 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## ##RefSeq-Attributes-START## ab initio :: 7% of CDS bases internal stop codons :: corrected 1 genomic stop codon ##RefSeq-Attributes-END## FEATURES Location/Qualifiers source 1..700 /organism="Propithecus coquereli" /mol_type="mRNA" /isolate="6110/MARCELLA" /db_xref="taxon:379532" /chromosome="Unknown" /sex="female" /tissue_type="kidney" gene 1..700 /gene="LUZP6" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 mRNA, 256 ESTs, 1 Protein, and 88% coverage of the annotated genomic feature by RNAseq alignments" /db_xref="GeneID:105808997" CDS 1..210 /gene="LUZP6" /note="The sequence of the model RefSeq protein was modified relative to its source genomic sequence to represent the inferred CDS: substituted 1 base at 1 genomic stop codon" /codon_start=1 /transl_except=(pos:64..66,aa:OTHER) /product="LOW QUALITY PROTEIN: leucine zipper protein 6" /protein_id="XP_012498206.1" /db_xref="GeneID:105808997" /translation="
MVEKPFISYALYQVQTGNLPVXSSGLTNSPLQLPTGIYRLIVQVQHLNFPSSSSMHSSPFYTQLGMKER"
ORIGIN
atggtagagaaaccattcatttcttatgcactatatcaagtacaaacaggtaatttacctgtttaaagtagtggactaacaaattctcccttgcagcttccgactggtatctacagacttatagttcaagtacagcacctgaatttcccaagtagttcttctatgcatagctcacctttctacacccagctgggcatgaaggagaggtaatacgtaggtgccgtttatggaagctgcgaacaagtgggccccctttattcactgatttcttgcctcagataatggatttcaaatctatatgtacctatttgatttttttttctaaaacttcaactgagctgctgttttcttccatgcaatattatatactcaattgtgtatagaagaagctggtgagagtgccctcctacataaataagcaattgcagtgttttgcatgcaaaatttaaaaaatttaaattgtcctgattctattttgtaaatggagaaacaatcatatctttctaagcagtaatggaggaagactagtgctttgtgcattttgatatatttgagttcatttttccataatgtcatatttttgacacaattgggtttctcataagtatcctagttcatgtacatcatccgaatgctaaataatactgtgtttaagttttgtgttgcaagaacaaatggaataaacttgaattgtgctaca
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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