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2024-05-19 06:53:57, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_012348106             294 bp    mRNA    linear   PLN 22-APR-2015
DEFINITION  Saprolegnia parasitica CBS 223.65 hypothetical protein partial
            mRNA.
ACCESSION   XM_012348106
VERSION     XM_012348106.1
DBLINK      BioProject: PRJNA280969
            BioSample: SAMN02981252
KEYWORDS    RefSeq.
SOURCE      Saprolegnia parasitica CBS 223.65
  ORGANISM  Saprolegnia parasitica CBS 223.65
            Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales;
            Saprolegniaceae; Saprolegnia.
REFERENCE   1  (bases 1 to 294)
  AUTHORS   Jiang,R.H., de Bruijn,I., Haas,B.J., Belmonte,R., Lobach,L.,
            Christie,J., van den Ackerveken,G., Bottin,A., Bulone,V.,
            Diaz-Moreno,S.M., Dumas,B., Fan,L., Gaulin,E., Govers,F.,
            Grenville-Briggs,L.J., Horner,N.R., Levin,J.Z., Mammella,M.,
            Meijer,H.J., Morris,P., Nusbaum,C., Oome,S., Phillips,A.J., van
            Rooyen,D., Rzeszutek,E., Saraiva,M., Secombes,C.J., Seidl,M.F.,
            Snel,B., Stassen,J.H., Sykes,S., Tripathy,S., van den Berg,H.,
            Vega-Arreguin,J.C., Wawra,S., Young,S.K., Zeng,Q.,
            Dieguez-Uribeondo,J., Russ,C., Tyler,B.M. and van West,P.
  TITLE     Distinctive expansion of potential virulence genes in the genome of
            the oomycete fish pathogen Saprolegnia parasitica
  JOURNAL   PLoS Genet. 9 (6), E1003272 (2013)
   PUBMED   23785293
REFERENCE   2  (bases 1 to 294)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (22-APR-2015) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 294)
  AUTHORS   Russ,C., Nusbaum,C., Tyler,B., van West,P., Dieguez-Uribeondo,J.,
            de Bruijn,I., Young,S.K., Zeng,Q., Gargeya,S., Alvarado,L.,
            Berlin,A., Chapman,S.B., Chen,Z., Freedman,E., Gellesch,M.,
            Goldberg,J., Griggs,A., Gujja,S., Heilman,E., Heiman,D.,
            Howarth,C., Mehta,T., Neiman,D., Pearson,M., Roberts,A., Saif,S.,
            Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J.,
            Yandava,C., Haas,B. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (14-FEB-2011) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_012156435).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..294
                     /organism="Saprolegnia parasitica CBS 223.65"
                     /mol_type="mRNA"
                     /strain="CBS 223.65"
                     /db_xref="taxon:695850"
                     /chromosome="Unknown"
     gene            <1..>294
                     /locus_tag="SPRG_08985"
                     /db_xref="GeneID:24131184"
     CDS             <1..294
                     /locus_tag="SPRG_08985"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_012203496.1"
                     /db_xref="GeneID:24131184"
                     /translation="
KAQRVTTLQDSASIVYIGDGVNDLLALLAADVGIVFGSPNASASRVARHFGVRLVDLADEKALSVAALAAHAATAKAENAPLLFRAPSWHILGLFLR"
     misc_feature    <1..114
                     /locus_tag="SPRG_08985"
                     /note="Haloacid Dehalogenase-like Hydrolases; Region:
                     HAD_like; cl21460"
                     /db_xref="CDD:451251"
ORIGIN      
aaggcgcaacgcgtgaccacgctgcaagacagcgcgagcatcgtctacattggcgacggcgtcaacgacctcctcgcactgctcgcagccgacgtcggcatcgtctttggcagcccgaatgcgtcggcgtcccgtgtcgcgcggcattttggcgtgcgccttgtcgatctcgcagacgaaaaagctttgtctgtcgcggcgttggcggcccatgcggcgacagccaaggcagaaaacgcacccttgctcttccgcgcaccgtcgtggcacattcttggcctgtttctgcgctaa
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]