2024-05-18 15:25:19, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_010484178 974 bp mRNA linear PLN 29-NOV-2016 DEFINITION PREDICTED: Camelina sativa root meristem growth factor 5 (LOC104761143), mRNA. ACCESSION XM_010484178 VERSION XM_010484178.2 DBLINK BioProject: PRJNA264159 KEYWORDS RefSeq. SOURCE Camelina sativa (false flax) ORGANISM Camelina sativa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Camelina. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_025702.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Nov 29, 2016 this sequence version replaced XM_010484178.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Version :: Camelina sativa Annotation Release 101 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 7.2 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..974 /organism="Camelina sativa" /mol_type="mRNA" /cultivar="DH55" /db_xref="taxon:90675" /chromosome="18" /tissue_type="leaf" gene 1..974 /gene="LOC104761143" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 27 samples with support for all annotated introns" /db_xref="GeneID:104761143" CDS 405..647 /gene="LOC104761143" /codon_start=1 /product="root meristem growth factor 5" /protein_id="XP_010482480.1" /db_xref="GeneID:104761143" /translation="
MSSIAASILLLFLLLHLSDSRHLDNVHITAKDQNVVSGLTPKEPVEVSRFVPRAVKHRRHRSPLLFADYPKPSTRPPRHN"
ORIGIN
ctcggggatcgtgtcaaagctcaaaaagtggtgttaacagtcatcgtcaacctccaaaccattctcgaggcagacaaaaacatttaagaatatttaccgtggtggtcggtaagttttggggattgaaatggcatggagacaagaagtagtaaatcactcgtttttcaccgaggtttaaatgtccttttccttttgttgtttctttctctcttttttgactcatctttggcttttcccatgagcttttccagcacattcatctggattgataaaaaaaaaagacttttttcaaatacaagtgtgaacttgctcgtattatatagtgtctactacctaccaattgcttttaacgttccataacccttatagtcgttaagccttgtgaactgtttctgttgtgaccaatgagctcaattgccgcttctatccttcttttgtttctgctcttgcacctctctgattctcgtcacctcgacaatgttcacatcactgccaaggatcaaaatgttgtctctggtttgacacctaaagaaccggtggaggtttctcggtttgtgccgcgtgcagtgaagcaccgccgtcatcggtcgccgctcttattcgcagattatccgaagccgtccacacggcctccgcgtcataactgaaacctctctcttttagtttttcatctttagagtttttttgtatgtgagagagtaaataggtccttgacaattttcttattatgtttccaaatgtggaactttgttttttttgtgtggagtataatagatttcatatgttttcctgacaaaaatctatccatgactgctctcaaaacatctcgattctgactacctgggcccatttactgggttgaagcccaattttggctcatttacagtcgtctcctattagttttgtttccagtttttttgattgtttcacttcgcaatgtttgtccacaacatgaatgattaatatcgtgttct
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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