2024-05-17 04:55:59, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_009142536 544 bp mRNA linear PLN 07-DEC-2020 DEFINITION PREDICTED: Brassica rapa protein CLAVATA 3 (LOC103864769), mRNA. ACCESSION XM_009142536 VERSION XM_009142536.3 DBLINK BioProject: PRJNA249065 KEYWORDS RefSeq. SOURCE Brassica rapa (field mustard) ORGANISM Brassica rapa Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Brassiceae; Brassica. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_024798.2) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Apr 3, 2020 this sequence version replaced XM_009142536.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Updated annotation Annotation Name :: Brassica rapa Updated Annotation Release 103.20201202 Annotation Version :: 103.20201202 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.5 Annotation Method :: Best-placed RefSeq; propagated RefSeq model Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..544 /organism="Brassica rapa" /mol_type="mRNA" /cultivar="Chiifu-401-42" /db_xref="taxon:3711" /chromosome="A04" /tissue_type="leaf" /dev_stage="two weeks" /country="China: Beijing" gene 1..544 /gene="LOC103864769" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 7 samples with support for all annotated introns" /db_xref="GeneID:103864769" CDS 1..366 /gene="LOC103864769" /codon_start=1 /product="protein CLAVATA 3" /protein_id="XP_009140784.2" /db_xref="GeneID:103864769" /translation="
MIAPLLLSHYQSKEQLLSFIYSISLYKMDSRTLVLLLLFCLMFLHDASDITHANANVHALPIRKMMVMKKDNEWGGANGIEEEKEKVFGLNEELRTVPSGPDPLHHHVNPPRKPRTDSHIP"
ORIGIN
atgattgccccccttctcctatctcattaccagagtaaagaacaacttctatcttttatatactctatctctctctacaaaatggattcgaggactctggtgctactgctgctcttttgcctcatgttcctgcatgatgcttctgatatcactcacgccaatgccaatgttcatgcacttcccattcgcaagatgatggtaatgaagaaggataatgaatggggaggagcaaatggaattgaagaagagaaggagaaggttttcgggttaaatgaagaactaaggactgtcccttcaggacctgaccctttgcaccatcatgtgaaccccccaagaaagccacgaaccgactctcatatcccttaaacctccttttttttctatgtatttcgtattataaattaactctgctgtttaatcggtttcatgttgagggattttctgttttatccctcactttccctaaggttgtgatgatagttaatgtaagataagcaccacttttgtttcccatggatctatttaggaaccccattttgatgta
//
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@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
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