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2024-05-19 04:49:42, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_008883331             285 bp    mRNA    linear   PLN 18-AUG-2014
DEFINITION  Aphanomyces invadans hypothetical protein partial mRNA.
ACCESSION   XM_008883331
VERSION     XM_008883331.1
DBLINK      BioProject: PRJNA258292
            BioSample: SAMN01907307
KEYWORDS    RefSeq.
SOURCE      Aphanomyces invadans
  ORGANISM  Aphanomyces invadans
            Eukaryota; Sar; Stramenopiles; Oomycota; Saprolegniales;
            Saprolegniaceae; Aphanomyces.
REFERENCE   1  (bases 1 to 285)
  AUTHORS   Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
            Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     The Genome Sequence of Aphanomyces invadans NJM9701
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 285)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (18-AUG-2014) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 285)
  AUTHORS   Russ,C., Tyler,B., van West,P., Dieguez-Uribeondo,J., Young,S.K.,
            Zeng,Q., Gargeya,S., Fitzgerald,M., Abouelleil,A., Alvarado,L.,
            Chapman,S.B., Gainer-Dewar,J., Goldberg,J., Griggs,A., Gujja,S.,
            Hansen,M., Howarth,C., Imamovic,A., Ireland,A., Larimer,J.,
            McCowan,C., Murphy,C., Pearson,M., Poon,T.W., Priest,M.,
            Roberts,A., Saif,S., Shea,T., Sykes,S., Wortman,J., Nusbaum,C. and
            Birren,B.
  CONSRTM   The Broad Institute Genomics Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (02-DEC-2013) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_008580524).
            COMPLETENESS: incomplete on the 3' end.
FEATURES             Location/Qualifiers
     source          1..285
                     /organism="Aphanomyces invadans"
                     /mol_type="mRNA"
                     /strain="NJM9701"
                     /db_xref="taxon:157072"
                     /chromosome="Unknown"
                     /collection_date="2012"
     gene            1..>285
                     /locus_tag="H310_15348"
                     /db_xref="GeneID:20092398"
     CDS             1..285
                     /locus_tag="H310_15348"
                     /codon_start=1
                     /product="hypothetical protein"
                     /protein_id="XP_008881553.1"
                     /db_xref="GeneID:20092398"
                     /translation="
MAGLNHGPARTQLFRVYPASFEEAVRIALAESVTFGVSAALFDARSLYLHKTRDPTRLIAVRASEHPLTVGVPQMIYWATWSICDQAAGNDKAQ"
ORIGIN      
atggctgggctcaaccacggtccagcacgaacacagcttttccgtgtctacccagcctcgttcgaagaggctgttcgtatcgcccttgctgagtcggtcacttttggcgtgagtgccgcgctcttcgacgcacgctcactctatctgcacaagacgcgcgatccgacccgactgatcgccgtccgagcaagcgaacatcctcttacggtgggcgtcccccaaatgatctactgggccacctggtcgatctgcgaccaggcggcgggaaacgacaaggcccagtag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]