2024-05-18 17:14:58, GGRNA.v2 : RefSeq release 222 (Jan, 2024)
LOCUS XM_006281338 1092 bp mRNA linear PLN 02-FEB-2018 DEFINITION PREDICTED: Capsella rubella root meristem growth factor 5 (LOC17874702), mRNA. ACCESSION XM_006281338 VERSION XM_006281338.2 DBLINK BioProject: PRJNA230563 KEYWORDS RefSeq. SOURCE Capsella rubella ORGANISM Capsella rubella Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Capsella. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NW_006238916.1) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Feb 2, 2018 this sequence version replaced XM_006281338.1. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI Annotation Status :: Full annotation Annotation Name :: Capsella rubella Annotation Release 100 Annotation Version :: 100 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 8.0 Annotation Method :: Best-placed RefSeq; Gnomon Features Annotated :: Gene; mRNA; CDS; ncRNA ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1092 /organism="Capsella rubella" /mol_type="mRNA" /cultivar="Monte Gargano" /bio_material="ABRC:CS22697" /db_xref="taxon:81985" /chromosome="Unknown" gene 1..1092 /gene="LOC17874702" /note="Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein, and 100% coverage of the annotated genomic feature by RNAseq alignments, including 11 samples with support for all annotated introns" /db_xref="GeneID:17874702" CDS 670..915 /gene="LOC17874702" /codon_start=1 /product="root meristem growth factor 5" /protein_id="XP_006281400.1" /db_xref="GeneID:17874702" /translation="
MSSIHAASILLLFLLLHLSDSRHLDNVHITAKDQNVVSGLTPKEPVKVSRFVPRAVKHRHHRPPLFFADYPKPSTRPPRHN"
ORIGIN
cagggaacattcttggtccagatgttgggttcttggttcttgaagctcttttactttgaactaacatgtgttatttgttttagaaacaggcaggatttgggcaattcaagaggactttttgaagacaagatgtctcggagattgcgtcaaagctcaaaaagtggtgttaacagtcatcgtcaacctccaaaccattctcgaggcagacaaaagcattaaggtaaattataataatgccttcaaaaagtgctttaagtttttcgcatattatataataatgatacaattcggaactagcttgcattttcttaatagaatatttaccgtggtggtcggtaagttttggggattggtctcaaataagatgttgtggagacaagaagtagtaaatcgctcgtttttcaccgaggtttatatgtctttttccttttgttgtttcttttttgactcatcttcggcttctcctatgagcttttccagcacattcatctggattgataagaaaaaacacttatttattcctgttttttgtgtgttctttttcttactttcaaatacttatgtgtgaactggctcttattatatagtgtctactacctagtaagtgcttttacgttctataacccttattgtcgttaacccttgagaactatttctgttgtgtgaccaatgagttcaattcatgctgcttcaatccttcttttgtttctgctcttgcatctttccgattctcgtcacctcgacaatgttcacatcactgccaaggatcaaaatgttgtctctggtttgacacctaaagaaccggtaaaggtttctaggtttgtgccgcgtgcagtgaagcaccgccatcatcggccgccactcttcttcgcagattatccgaagccgtccacgcggcctccgcgtcataactgaaacctctctctctcttgtagtttttttcatctttaggagtgtttttgtatgtgagagagtaaataggtcctttaacaattttcttaatacgtttccaagatgttggaactcttttttgaagtataggttcatgtttccctgacaaattctatctattttgagtaagttttcccaaaa
//
by
@meso_cacase at
DBCLS
This page is licensed under a
Creative Commons Attribution 4.0 International License (CC BY 4.0).
If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596.
[Full Text]