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2024-05-18 15:55:14, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       XM_004991808             300 bp    mRNA    linear   INV 01-MAY-2020
DEFINITION  Salpingoeca rosetta uncharacterized protein (PTSG_06483), partial
            mRNA.
ACCESSION   XM_004991808
VERSION     XM_004991808.1
DBLINK      BioProject: PRJNA193541
            BioSample: SAMN00013333
KEYWORDS    RefSeq.
SOURCE      Salpingoeca rosetta
  ORGANISM  Salpingoeca rosetta
            Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae;
            Salpingoeca.
REFERENCE   1  (bases 1 to 300)
  AUTHORS   Russ,C., Cuomo,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N.,
            Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Young,S.K., Zeng,Q.,
            Gargeya,S., Alvarado,L., Berlin,A., Chapman,S.B., Chen,Z.,
            Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S.,
            Heilman,E., Heiman,D., Howarth,C., Mehta,T., Neiman,D., Pearson,M.,
            Roberts,A., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C.,
            Sykes,S., White,J., Yandava,C., Haas,B., Nusbaum,C. and Birren,B.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Annotation of Salpingoeca rosetta
  JOURNAL   Unpublished
REFERENCE   2  (bases 1 to 300)
  CONSRTM   NCBI Genome Project
  TITLE     Direct Submission
  JOURNAL   Submitted (30-APR-2020) National Center for Biotechnology
            Information, NIH, Bethesda, MD 20894, USA
REFERENCE   3  (bases 1 to 300)
  AUTHORS   Russ,C., Cuomo,C., Shea,T., Young,S.K., Zeng,Q., Koehrsen,M.,
            Haas,B., Borodovsky,M., Guigo,R., Alvarado,L., Berlin,A.,
            Bochicchio,J., Borenstein,D., Chapman,S., Chen,Z., Engels,R.,
            Freedman,E., Gellesch,M., Goldberg,J., Griggs,A., Gujja,S.,
            Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B.,
            Mehta,T., Park,D., Pearson,M., Roberts,A., Saif,S., Shenoy,N.,
            Sisk,P., Stolte,C., Sykes,S., Thomson,T., Walk,T., White,J.,
            Yandava,C., Burger,G., Gray,M.W., Holland,P.W.H., King,N.,
            Lang,F.B.F., Roger,A.J., Ruiz-Trillo,I., Lander,E. and Nusbaum,C.
  CONSRTM   The Broad Institute Genome Sequencing Platform
  TITLE     Direct Submission
  JOURNAL   Submitted (14-AUG-2009) Broad Institute of MIT and Harvard, 7
            Cambridge Center, Cambridge, MA 02142, USA
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. This record is derived from an annotated genomic
            sequence (NW_004754916).
            COMPLETENESS: incomplete on both ends.
FEATURES             Location/Qualifiers
     source          1..300
                     /organism="Salpingoeca rosetta"
                     /mol_type="mRNA"
                     /strain="ATCC 50818"
                     /culture_collection="ATCC:50818"
                     /db_xref="taxon:946362"
                     /chromosome="Unknown"
     gene            <1..>300
                     /locus_tag="PTSG_06483"
                     /db_xref="GeneID:16072425"
     CDS             1..300
                     /locus_tag="PTSG_06483"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_004991865.1"
                     /db_xref="GeneID:16072425"
                     /translation="
MHTLARGKHGAGYVLEEGITNNRRTETATSTAAARALRPTNAEAETPLSPTAQTTEVPPRHNEKLGRNHTRWMSKEVMVVVGVSKPQTLDRSYIRLHDN"
ORIGIN      
atgcacaccctcgcccgagggaagcacggcgcgggctatgtattagaagaaggcatcaccaacaaccgcaggaccgagacagcaacgtcaacggcagcagcgcgcgcacttcgccccactaatgctgaggcggaaacgccgctgagcccgacagcgcagaccacagaggttccaccgcgccataacgagaagctgggccgcaatcacacccggtggatgagcaaggaagtgatggtcgttgttggtgttagcaaaccgcagaccctcgaccgcagctacatcagacttcatgacaactag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]