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2024-04-30 22:21:24, GGRNA.v2 : RefSeq release 222 (Jan, 2024)

LOCUS       NM_024470                942 bp    mRNA    linear   ROD 16-FEB-2022
DEFINITION  Mus musculus killer cell lectin-like receptor subfamily A, member
            23 (Klra23), mRNA.
ACCESSION   NM_024470 XM_003945716
VERSION     NM_024470.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 942)
  AUTHORS   Ma BJ, Craveiro Salvado CM and Kane KP.
  TITLE     The activating Ly49W and inhibitory Ly49G NK cell receptors display
            similar affinities for identical MHC class I ligands
  JOURNAL   Immunogenetics 66 (7-8), 467-477 (2014)
   PUBMED   24797174
  REMARK    GeneRIF: The ectodomain of inhibitory Ly49G of the BALB/c mouse
            strain is highly similar to the Ly49W activating receptor in the
            nonobese diabetic (NOD) mouse.
REFERENCE   2  (bases 1 to 942)
  AUTHORS   Schenkel AR, Kingry LC and Slayden RA.
  TITLE     The ly49 gene family. A brief guide to the nomenclature, genetics,
            and role in intracellular infection
  JOURNAL   Front Immunol 4, 90 (2013)
   PUBMED   23596445
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 942)
  AUTHORS   Makrigiannis AP, Pau AT, Saleh A, Winkler-Pickett R, Ortaldo JR and
            Anderson SK.
  TITLE     Class I MHC-binding characteristics of the 129/J Ly49 repertoire
  JOURNAL   J Immunol 166 (8), 5034-5043 (2001)
   PUBMED   11290784
REFERENCE   4  (bases 1 to 942)
  AUTHORS   Silver ET, Gong D, Hazes B and Kane KP.
  TITLE     Ly-49W, an activating receptor of nonobese diabetic mice with close
            homology to the inhibitory receptor Ly-49G, recognizes H-2D(k) and
            H-2D(d)
  JOURNAL   J Immunol 166 (4), 2333-2341 (2001)
   PUBMED   11160290
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from AF074459.1.
            
            On Oct 10, 2012 this sequence version replaced XM_003945716.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF074459.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..942
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="NOR"
                     /db_xref="taxon:10090"
                     /chromosome="6"
                     /map="6"
     gene            1..942
                     /gene="Klra23"
                     /gene_synonym="Ly-49W1; Ly-49W2; Ly49W"
                     /note="killer cell lectin-like receptor subfamily A,
                     member 23"
                     /db_xref="GeneID:79410"
                     /db_xref="MGI:MGI:1930932"
     CDS             124..930
                     /gene="Klra23"
                     /gene_synonym="Ly-49W1; Ly-49W2; Ly49W"
                     /note="killer cell lectin-like receptor subfamily A,
                     member 17"
                     /codon_start=1
                     /product="killer cell lectin-like receptor subfamily A,
                     member 23"
                     /protein_id="NP_077790.1"
                     /db_xref="GeneID:79410"
                     /db_xref="MGI:MGI:1930932"
                     /translation="
MSEQEVTFSAVRFHKSSGLQNRVRLEETGKPQKAGLRVCSVPWQLIVIALGILISLRLVIVSVLVTNIFQNSQQNHELQETLNCHDKCSTTTQSDINLKDELLSSTSIECRPGNDLLESLHKEQNRWYSETKTFSDSSQHTGRGFEKYWFCYGIKCYYFVMDRKTWSGCKQTCQISSLSLLKIDNEDELKFLQNLAPSDISWIGFSYDNKKKDWVWIDNGPSKLALNTTKYNIRDGLCMSLSKTRLDNGDCGKSYICICGKRLDKFPH"
     misc_feature    241..600
                     /gene="Klra23"
                     /gene_synonym="Ly-49W1; Ly-49W2; Ly49W"
                     /note="Ly49-like protein, N-terminal region; Region: Ly49;
                     pfam08391"
                     /db_xref="CDD:429969"
     misc_feature    559..906
                     /gene="Klra23"
                     /gene_synonym="Ly-49W1; Ly-49W2; Ly49W"
                     /note="C-type lectin-like domain (CTLD) of the type found
                     in natural killer cell receptors (NKRs); Region:
                     CLECT_NK_receptors_like; cd03593"
                     /db_xref="CDD:153063"
     misc_feature    order(721..723,802..804,856..858,862..867)
                     /gene="Klra23"
                     /gene_synonym="Ly-49W1; Ly-49W2; Ly49W"
                     /note="ligand binding surface [chemical binding]; other
                     site"
                     /db_xref="CDD:153063"
ORIGIN      
gggatacagaccaggaaagacccacattaccccaacagggacatccattccttctacccacctcacttcagaaatcactcaagtacatattttaaaagagaacatactctacatcctcccaagatgagtgagcaggaggtcactttctcagctgtgagattccataagtcttcagggttgcagaaccgggtgaggcttgaggagacagggaagcctcaaaaagctggcctcagagtgtgttcagttccctggcagctcattgtgatagctctcggaatcctcatttcccttcgactggtaattgtctcagtgcttgtgacaaacatttttcagaatagtcaacaaaatcatgaactgcaggaaactctaaactgccacgataagtgcagcaccaccacgcaaagtgacatcaacttgaaggatgaactgctgagttctacatctatagagtgtaggccaggcaatgatcttctggaatccctccacaaggaacagaacagatggtacagtgaaaccaagactttttcagattcctcacagcacacaggcagaggttttgaaaaatattggttctgttatggtataaaatgttattatttcgtcatggacagaaaaacgtggagtggatgtaaacagacctgccagatttccagcttatcccttctgaagatagacaatgaggatgaactgaagttccttcagaacctggctccttcagacatttcctggattggattttcatatgacaataagaaaaaagattgggtatggattgacaatggcccatctaaacttgccttgaacacaacgaaatataatataagagatggattatgtatgtcgttatctaaaacaagactagacaatggggactgtggtaaatcatacatctgtatttgtggtaagagactggataaattccctcattgactctccaacgag
//

by @meso_cacase at DBCLS
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If you use GGRNA in your work, please cite:
Naito Y, Bono H. (2012)
GGRNA: an ultrafast, transcript-oriented search engine for genes and transcripts.
Nucleic Acids Res., 40, W592-W596. [Full Text]