LOCUS       NM_001082547             414 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus cystatin domain containing 4 (Cstdc4), mRNA.
ACCESSION   NM_001082547 XM_484543 XM_915346 XM_993634
VERSION     NM_001082547.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 414)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BB843120.1 and AC154188.2.
            
            On or before Mar 10, 2007 this sequence version replaced
            XM_484543.3, XM_915346.2, XM_993634.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BY768199.1, BB736133.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164134, SAMN01164135
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-365               BB843120.1         1-365
            366-414             AC154188.2         92281-92329
FEATURES             Location/Qualifiers
     source          1..414
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="16"
                     /map="16 25.43 cM"
     gene            1..414
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /note="cystatin domain containing 4"
                     /db_xref="GeneID:433016"
                     /db_xref="MGI:MGI:3645124"
     exon            1..114
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /inference="alignment:Splign:2.1.0"
     misc_feature    13..15
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /note="upstream in-frame stop codon"
     CDS             49..342
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /codon_start=1
                     /product="EG433016 protein"
                     /protein_id="NP_001076016.1"
                     /db_xref="CCDS:CCDS37328.1"
                     /db_xref="GeneID:433016"
                     /db_xref="MGI:MGI:3645124"
                     /translation="

MMPGGLSRARSATPEIQEIADKVKSLLEEKTNEKYEVFKAVEYKSQVVAGQNYFIKMDVGGGCFLHIKVFKGISGENVLELHGYQTNKTRKDELSYF"

     misc_feature    58..318
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /note="Cystatin domain; Region: Cystatin; pfam00031"
                     /db_xref="CDD:425431"
     misc_feature    order(184..192,196..198)
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /note="putative proteinase inhibition site [active]"
                     /db_xref="CDD:238002"
     exon            115..216
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /inference="alignment:Splign:2.1.0"
     exon            217..414
                     /gene="Cstdc4"
                     /gene_synonym="EG433016; Gm5483"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      

gatcatttcttctaagtgtcctatcgagcaaagaagcaactcatcagaatgatgcctggaggcttgtcacgggccagatctgccacaccagaaatccaggagattgctgataaggttaagtcactgcttgaagagaaaaccaatgagaaatatgaagtgttcaaagctgttgagtataaatctcaagtcgtcgctggacaaaattacttcattaagatggatgttggtggtggttgtttcctccacataaaggtcttcaaagggatttctggagaaaatgttttagaacttcatggttaccagactaacaaaaccaggaaagacgagctgtcctacttctaagcagcaaattctaaagtgacctgattcttcttgtaaacaaatttagccttcaataaagaaatattcttgaaa

//